Taylorella asinigenitalis 14/45: KUM_1163
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Entry
KUM_1163 CDS
T02603
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tat
Taylorella asinigenitalis 14/45
Pathway
tat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KUM_1163 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tat03021
]
KUM_1163 (rpoC)
03400 DNA repair and recombination proteins [BR:
tat03400
]
KUM_1163 (rpoC)
Enzymes [BR:
tat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KUM_1163 (rpoC)
Transcription machinery [BR:
tat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KUM_1163 (rpoC)
DNA repair and recombination proteins [BR:
tat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KUM_1163 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
CCG19946
UniProt:
I7IC51
LinkDB
All DBs
Position
complement(1205458..1209780)
Genome browser
AA seq
1440 aa
AA seq
DB search
MKGILNLYGQVSNSKDQFDSIRIGIASPDKIRSWSYGEVRKSETINYRTSKPERDGLFCG
KIFGPIKDYECSCGKYKRKKHRGVICEKCGVEVTESKVRRERMGHIELASPVAHIWFLKS
LPSRLGMVLDMTLRDIERVLYFEAWCVTDPGMTPLKRGQIMTSEEYDRRTEEYGDEFEAS
MGAEAIRELLQTIDIDKEVETLREALEVTKSDAKVKKISKRLKVIEGFQKSGIKPEWMIL
EVLPVLPPNLRPLVPLDGGRFAVSDLNKLYINVINRNNRLKRLFELKTAPEIIIRNEKRM
LQEAVDSLLDNGRRGKAMTGANKRQLKSLADNIKGKNGRFRQNLLGKRVDYSGRSVITVG
PQLKLHQCGLPKLMALELFKPFIHNRLYKLGIAKNFNEAKRMVESQDPQVWDILAEVIRE
HPVMLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQM
EVRTLLLASNNVLFPASGEPSIVPSQDTVLGLYYATRERINGKGEGMFFSDIQEMLRAYN
NGDVGLQSRITVRLNEYSKDENGNYVPQLKRFQTTVGRALLSEILPKGLPFSVLNKALKK
KEISRLINQSFRRCGLRDTVIFADKLLQSGFSLATKAGISIAMVDMVIPKEKEEILAKAA
AEVKEIDNQYSSGLVTAQERYNNVVDIWGKAGDKVGKKMMETLSTEPVIDRFGDELTQES
FNSIYMMADSGARGSVAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHG
ARKGLADTALKTANSGYLTRRLVDVTQDLVITEQDCGTSNGYVMKALVEGGDVIEPLRDR
VLGRVAALDILDPETQQIAIPAGTLLDEDKVELIDKLGIDEVKIRTPLTCETRHGLCAHC
YGRDLGRGYLVNRGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRASLASAVETKSAGRI
GFAGSMRYVTNAKKERVAISRSGEIVVYDDQNRERERHKVPYGATVLVGDGDQVNAGAQL
ASWDPLTRPIVSEYKGRVKFENIEEGVTVAKQVDEITGLSTLVVITPKTRTGKSVLRPQI
KLLNDIGEEVKIVGSEHPVNITFPVGALITVRDGQDVDVGEILARIPQESQKTRDITGGL
PRVVELFEARSPKNAGVLADVTGNVSFGKETKGKQRLIITKVDGEEHEILIPKEKQVLVH
DGQVVNQGELIVDGPPDPHDILRLKGIEALAQYIVNEVQDVYRLQGVKINDKHIEVIVRQ
MLRRVNIVDAGDTDFIPGEQVERAVLLNENDRMREEGKREATYENVLLGITKASLSTDSF
ISAASFQETTRVLTEAAIIGKRDKLNGLKENVIVGRLIPAGTGLAYHLARKAASNGSSSM
GSSDMSSSSSSVVENPFEEVAGAASQAKDNAADDLGGAMSSFFTLPTTSNNNDTPDPQNQ
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtattcttaacctttacggacaagtatccaacagcaaagatcagttcgattca
attcgaattggtattgcctcaccagataaaatccgttcttggtcttacggtgaagttcgt
aagtcagaaacaattaactatcgcacatctaaacctgagcgcgatggcttattctgcgga
aaaatctttggtcctatcaaagattacgaatgttcatgcggtaagtacaaacgtaaaaaa
catcgtggcgtaatctgcgaaaaatgcggtgttgaagtaactgagtctaaggttcgtcgt
gaacgcatgggtcatatcgagctagcaagtccagttgcacatatttggttcttaaaaagc
ttgccttctcgtctaggtatggtgcttgatatgacattgcgtgatattgaacgcgtgttg
tattttgaagcatggtgcgttacagaccctggtatgaccccattaaaacgtggacaaatc
atgacttccgaagagtatgatcgtcgcacagaagaatatggtgatgaatttgaagcttct
atgggtgcagaggctattcgtgagcttctccaaaccatcgatatagataaagaagtagag
acattacgcgaagcattggaagtaactaagtctgatgcaaaagttaagaaaatctctaag
cgtctaaaagtaattgaaggtttccaaaaatcaggaattaaacctgagtggatgatattg
gaagtattgccagtattgccacctaacttaagaccattggtaccacttgatggcggaaga
tttgcagtatcagatcttaataagctttatataaacgttattaaccgtaataatcgactt
aaacgtttattcgagcttaaaactgctccagaaattatcatacgtaacgaaaaacgtatg
cttcaagaggcagtagattcattgctagataatggtcgtcgcggtaaagcgatgactggt
gcaaacaaacgtcaacttaagtcattggcagataatatcaagggtaaaaacggtcgtttc
cgtcaaaaccttcttggtaaacgtgttgactactcaggccgttcggttattactgttggt
cctcaacttaaacttcatcaatgcggtctgccgaaattgatggctcttgagttgtttaaa
ccttttattcacaatcgtttatataaacttggtattgcgaaaaacttcaatgaagctaaa
cgtatggttgagagtcaagatccacaggtatgggatatcttggctgaagttattcgtgaa
caccctgtaatgttaaaccgtgcaccaactctacatagacttggtattcaagcgtttgag
ccgcaattaattgagggcaaagctattcaacttcatccgttggtttgtgcggcatttaac
gccgacttcgacggtgaccaaatggctgttcacgtaccgctttcacttgaagctcaaatg
gaagttcgcactctattgcttgcctctaataatgtgttgtttccagcaagtggtgagcct
tcaatcgtaccttctcaagatacggtattgggattatattatgctactcgtgaacgtatt
aacggtaagggcgagggcatgttcttctctgatattcaagagatgttacgtgcatataat
aacggagacgttggacttcaatctcgcataactgtacgactaaatgaatactcaaaagac
gagaatggaaattacgtgccgcaacttaaacgtttccaaactacagtgggtcgtgcgttg
ttgtcggaaatattgccaaaaggcttgccatttagtgttcttaataaagcactgaagaaa
aaagagatttctcgtttaattaatcagtcgttccgtcgttgcggtcttcgagatactgtg
atatttgcggacaaactgctgcaatctggtttcagtcttgcaactaaagcaggtatttcg
attgctatggtcgatatggtcataccaaaagagaaagaagaaattcttgcaaaagctgca
gccgaagttaaagagatcgacaatcaatactcttcaggtcttgtaacggctcaagagcgt
tataacaatgtggtcgacatttggggtaaagcaggtgataaagttggtaagaaaatgatg
gagacattgtcaactgaacctgttatcgatagattcggtgatgaacttactcaagagtca
tttaactctatttatatgatggcggactcgggtgctcgtggttctgtggctcaaattcgt
cagcttgctggtatgcgtggtttgatggctaaaccagatggttccattattgagactcca
attaccgctaacttccgcgaaggtctaaacgtattacagtacttcatctcaactcacggt
gctcgtaaaggtcttgccgatactgctcttaaaacagcgaactcaggttacttaactcgt
cgtctagtggacgttactcaagatttagtaatcactgaacaagattgcggtacaagcaat
ggttatgtgatgaaagcacttgttgaaggtggggatgttatagagcctcttcgcgatcgt
gtattaggacgtgttgctgcgttggatattcttgaccctgaaacgcaacaaattgccatc
cctgcaggcacattgctagatgaagataaagtagaacttatcgataaacttggaattgac
gaagttaagattcgcactccgctaacttgcgaaacacgtcatggtctttgtgcacattgc
tatggacgcgacttaggtcgtggctatttagtaaatcgcggtgaagctgtcggagttatt
gcagctcaatcaatcggtgagcctggtactcagcttaccatgcgtaccttccacattggt
ggtgccgcatctcgtgcctcactagcttccgctgttgaaactaaatcagctggtcgcatc
ggctttgctggctctatgcgttatgtaactaatgcgaagaaagagcgagttgcgatttca
cgttcaggtgagattgttgtttatgatgatcaaaatcgcgaaagagagcgccacaaagtt
ccttacggtgctacggttttagttggtgacggcgatcaagtaaatgccggtgcacagctt
gcatcatgggatccgttaacacgtcctatcgtgtctgagtataaaggtcgcgtgaaattc
gagaatatcgaagaaggcgtaaccgttgccaaacaagtggatgagattacggggctatca
actctagttgtgattactccaaaaactcgcacaggcaaaagcgttcttcgtccgcagatc
aagcttctaaatgatatcggcgaagaggtaaaaatcgttggttctgaacatccagtaaat
attacattcccagtgggtgccttgattactgtgcgtgatggccaagatgtagacgtgggt
gagattttagctcgtatccctcaagaatctcagaaaacacgcgatattacaggtggtcta
cctcgcgttgttgaacttttcgaggctcgttctccgaaaaatgctggtgtgcttgctgat
gtcactggcaatgtttccttcggcaaggaaactaagggtaagcaacgtctaatcattact
aaagtagacggtgaagagcacgaaatcctgattcctaaggagaaacaagttcttgttcac
gatggtcaagttgtaaaccaaggtgaacttatcgttgacggacctcctgacccacacgat
atcttgagacttaaaggtatcgaagcacttgctcaatatattgtgaacgaagtgcaagat
gtctaccgtctacaaggtgtgaaaatcaatgataagcatatcgaagtgattgttcgtcaa
atgcttcgtcgcgtaaatattgttgatgcaggcgatactgatttcatccctggagagcaa
gttgagcgtgcggtgcttttaaatgaaaatgatcgcatgcgtgaagaaggtaaacgtgaa
gccacttacgaaaatgtccttttaggtattactaaggcttccttgtctactgactcattt
atctctgcggcatcgttccaagagacaactcgcgttctaacagaagctgcgattataggt
aaacgcgataaacttaacggacttaaagagaacgttatcgttggtcgtttaattccagca
ggtactgggcttgcatatcacctagctagaaaagcagcatcaaatggatctagctccatg
ggttcgtcggatatgtcgtcaagctcatcgagtgttgttgaaaatccattcgaagaggtg
gctggagctgcaagtcaagcgaaggataatgcagctgatgatttaggtggtgcgatgtcg
tcattctttacattgccaactacaagcaataataacgatactcctgatccacaaaatcag
tag
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integrated database retrieval system
