Tatumella sp. TA1: EFZ10_00140
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Entry
EFZ10_00140 CDS
T09934
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
tatu
Tatumella sp. TA1
Brite
KEGG Orthology (KO) [BR:
tatu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tatu03021
]
EFZ10_00140 (rpoH)
Transcription machinery [BR:
tatu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EFZ10_00140 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
IF2_N
HTH_3
HTH_AsnC-type
UCR_14kD
GntR
HTH_25
HTH_11
HTH_DeoR
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
QGX90178
LinkDB
All DBs
Position
26019..26876
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AA seq
285 aa
AA seq
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MTNEMQALAIAPLGNLDAYIRAANGCPMLSAEEEKALAERLHYQSDLDAAKKLILSHLRF
VVHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMSAQDM
AFDLTSDDDNAEGKSLVPALYLQDKTSDFADGIEEDNWDSHAADKLTDAMMTLDERSQNI
IRARWLDDDNKITLQELADQYGVSAERVRQLEKNAMKKLRVAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgaaatgcaagctttagctattgctcctttaggtaacctcgatgcttacatc
cgagctgccaatggctgcccgatgctgtcggccgaagaggaaaaagcattagcagaacgg
ctgcattaccagtctgatctggatgcagcgaaaaagctgatcctgtcacatctgcggttt
gtggttcacgttgctcgtaactattcaggttatggcttacctcaggccgatcttattcag
gaaggtaacataggcttgatgaaagccgttcgccgctttaatcctgaagtcggggtaagg
ctagtatcctttgccgttcactggatcaaggctgaaatacatgagtacgtcctacgtaac
tggcgaatcgttaaggttgcgacaaccaaggcacagcgtaagttattcttcaatttgcgt
aaaactaagcaacgcttaggatggtttaatcaagacgaagttgaaatggtcgcacgcgag
ttgggcgtgagcagtaaagatgtacgcgagatggaatcccgcatgtctgctcaggatatg
gcctttgatctaacgtctgacgacgataacgcagaaggtaaatccctggttccggctctt
tatcttcaagataaaacgtcagactttgccgatggtatcgaagaagataactgggactcg
cacgcagcggacaaactcactgatgctatgatgacccttgacgagcgtagccaaaacatt
attcgtgctcgctggttggatgatgataacaaaatcaccctgcaggaactggctgaccaa
tatggtgtctcagccgagcgcgttcgtcagcttgaaaagaacgcgatgaaaaaattacgt
gtcgccatcgaggcgtaa
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