Tatumella sp. TA1: EFZ10_00815
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Entry
EFZ10_00815 CDS
T09934
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tatu
Tatumella sp. TA1
Pathway
tatu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tatu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EFZ10_00815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tatu03021
]
EFZ10_00815
03400 DNA repair and recombination proteins [BR:
tatu03400
]
EFZ10_00815
Enzymes [BR:
tatu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EFZ10_00815
Transcription machinery [BR:
tatu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EFZ10_00815
DNA repair and recombination proteins [BR:
tatu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EFZ10_00815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QGX90300
LinkDB
All DBs
Position
146376..147365
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGIQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDESASVNMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
DRIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLDAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagttagt
tcgacgcacgccaaggtgacccttgaaccattagagcgtggctttggccacactttaggt
aacgcactgcgccgtattctgctttcatccatgccgggttgcgcggtgaccgaggttgaa
attgatggtgtacttcatgagtacagcaccaaagaagggatccaagaagatattctcgaa
atcctgctcaacctgaaagggcttgcggtaagagttcaaggtaaagatgaagttatttta
actttgaataaatctggcattggccctgtgactgcagccgacatcacccatgatggtgat
gtcgaaatcgtcaagccgcagcacgtaatctgccacctcactgacgagagcgcatctgta
aatatgcgtatcaaagttcagcgtggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccaatcggacgtttgttagttgatgcttgttacagccctgta
gaccgtatcgcctacaatgttgaagcagctcgcgtagaacaacgtacagatttggacaag
ctagtcatcgaaatggaaactaacggcacaatcgatcctgaagaggcgattcgtcgtgca
gcgactatactggctgaacaacttgatgcttttgttgatttacgtgacgtacgtcaacca
gaagttaaagaagagaaaccagaattcgatccgatcttgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcttgaaagcagaagctatccactacatcggtgat
ctggtacaacgtaccgaggttgagcttcttaagacgcctaaccttggtaaaaaatctctt
actgagattaaagacgtgctggcttcacgtggactttctctaggcatgcgcttagaaaat
tggccacctgcaagcattgcagatgagtaa
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