Tatumella sp. TA1: EFZ10_01600
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Entry
EFZ10_01600 CDS
T09934
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tatu
Tatumella sp. TA1
Pathway
tatu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tatu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EFZ10_01600 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatu03019
]
EFZ10_01600 (pnp)
03016 Transfer RNA biogenesis [BR:
tatu03016
]
EFZ10_01600 (pnp)
Enzymes [BR:
tatu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EFZ10_01600 (pnp)
Messenger RNA biogenesis [BR:
tatu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EFZ10_01600 (pnp)
Transfer RNA biogenesis [BR:
tatu03016
]
Prokaryotic type
tRNA degradation factors
EFZ10_01600 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
S1_2
KH-I_KHDC4-BBP
aRib
OB_RRP5_4th
Spt6_S1
KH_SLS1_2
UPF0181
Motif
Other DBs
NCBI-ProteinID:
QGX93072
LinkDB
All DBs
Position
312330..314468
Genome browser
AA seq
712 aa
AA seq
DB search
MLNPTIQKFQYGQHTVTIETGMMARQATAAVMVSMDDTCVFVTVVGQKKAKAGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVHPDIVAMIGASAALSLSGIPFNGPIGSARVGYINDQYVLNPTADELATSRLDLVVA
GTENAVLMVESEAEILSEDQMLGAVVFGHDQQQVVIENIKQLVEKAGKPRWDWQPEAVSE
SLNSRIAALAESRLSEAYRITEKQQRYAQVDAIKGETTAALLAEDETLDEGEISDILHAI
EKNVVRSRVLNGEPRIDGREKDMVRGLDVRTGVLPRTHGSSLFTRGETQALVTATLGTAR
DAQNLDELMGEKSDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKQDE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDERFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQAALSQAKGARLHILSVMEEA
IGTHRGDISEFAPRIHTIRISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAKEAIRRIEEITADIEVGRIYPGKVTRIVDFGAFVSIGGGKEGLVHISQIADKRVE
KVSDYLQMAQEVPVKVLEIDRQGRVRLSIKEAVEKPQTESNEATEAPTTDAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgacaattcaaaaattccaatacggtcaacataccgtaaccatcgaaact
ggcatgatggcgcgtcaagcgaccgcagccgtgatggtaagcatggacgatacttgtgta
ttcgttactgttgtaggccagaaaaaagcgaaagcaggccaagactttttcccattgacc
gtcaactaccaggagcgtacttacgctgcaggccgtatcccaggcagcttcttccgtcgc
gaaggtcgtcctagcgaaggcgaaacgttaatcgctcgtcttattgaccgtccggtacgc
ccattattcccagaaggtttcgttaacgaagtacaggttattgcgaccgtcgtttccgtt
aacccacaagtacaccctgatatcgttgcgatgatcggtgcctcagcagcgctgtcactg
tctggtatcccgttcaacggtccgattggttcagcccgtgtgggttacatcaatgatcaa
tatgttttaaacccaacggctgacgagctggctaccagccgcttagacctcgtcgttgcg
ggcaccgaaaatgccgtattgatggttgaatctgaagctgaaattctgtcagaagaccaa
atgttaggcgcggttgttttcggtcatgaccaacaacaagttgttattgaaaatattaaa
caactcgttgagaaagcgggcaaaccacgttgggattggcagccagaagctgttagcgaa
agccttaacagccgtatcgcagcgctggcggagagccgtttaagcgaagcttaccgtatc
actgaaaaacaacagcgttatgctcaagtcgacgctattaaaggtgaaacgaccgcagct
ttactagcggaagatgaaaccttagacgaaggcgagatcagcgatatcctgcacgcgatc
gagaaaaacgttgtgcgtagccgtgttctgaatggtgaaccacgcattgatggtcgtgaa
aaagacatggtccgtggcctagatgtacgtactggcgttctgccacgtacacacggttca
tcactgttcactcgtggtgagacacaagccctagttacggcaacgcttggtactgcacgt
gatgcgcagaaccttgatgagctgatgggtgaaaaatctgattcgttcctatttcactat
aacttccctccgtactcagtgggtgagactggaatggtcggctcgcctaagcgtcgtgaa
attggtcatggtcgtttagcaaaacgtggtgtcttggccgttatgcctaagcaagacgag
ttcccgtacactgttcgtgtcgtatcggaaatcaccgaatcgaacggttcttcttcaatg
gcttctgtctgtggcgcatccttagcactgatggacgctggcgttccaatcaaagccgcg
gtagccggtattgcgatgggtctggttaaagaagatgagcgtttcgtcgtactgtctgac
atcttaggtgacgaagaccaccttggcgatatggacttcaaagtcgcgggtagccgcgaa
ggtatcactgcgctgcagatggatatcaaaattgaaggtatcacgcgtgaaatcatgcaa
gcggctcttagccaagcaaaaggcgctcgtttacatattctaagcgtgatggaagaagcg
atcggtacgcaccgtggtgatatctctgagttcgcgccacgcatccataccattcgtatc
agcccagataagatcaaggatgttatcggtaagggcggttcagtgatccgtgcactgact
gaagagaccggcactactatcgaaatcgaagacgatggtaccgtgaaaatcgccgcaact
gatggtgacaaagcaaaagaagctatccgtcgcatcgaagaaatcaccgcagatatcgag
gttggtcgtatttacccaggtaaagttactcgtatcgtagatttcggcgcgttcgtttct
atcggtggtggtaaagaaggtctggtacacatttctcaaatcgccgacaagcgtgttgag
aaagtttctgactacctgcaaatggcacaagaagttcctgtcaaggtgttggaaatcgac
cgtcaaggccgcgtacgtttaagtatcaaagaagctgtggaaaaaccacagactgagtct
aacgaagcgactgaagcgccaactactgacgctgaataa
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