Tatumella sp. TA1: EFZ10_02240
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Entry
EFZ10_02240 CDS
T09934
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tatu
Tatumella sp. TA1
Pathway
tatu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tatu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EFZ10_02240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatu03019
]
EFZ10_02240
03009 Ribosome biogenesis [BR:
tatu03009
]
EFZ10_02240
Messenger RNA biogenesis [BR:
tatu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EFZ10_02240
Ribosome biogenesis [BR:
tatu03009
]
Eukaryotic type
Pre-60S particles
RNases
EFZ10_02240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QGX90557
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All DBs
Position
453327..453872
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AA seq
181 aa
AA seq
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MTQSKDNLIWIDLEMTGLDPQRDRIIEIATIVTDAQLNVLAEGPVLAVHQSDEQLALMDE
WNVTTHTHSGLVSRVKQSTVTEAQAEQLTLAFLKQWVPENSSPICGNSIGQDRRFLVNYM
PELENYFHYRALDVSTLKELARRWKPEILQQFHKKGTHQALDDIRESIAELAFYKENFLK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaagtaaagataaccttatatggattgatttagagatgactggcttggatcca
cagcgtgatcggattattgagatcgcgaccatcgttaccgatgcacagctaaatgtgttg
gcagaggggcccgtactagcggttcaccagagtgacgagcagttagcgttaatggatgag
tggaatgtaactacccatacccatagcggcttagtatcgcgtgtgaaacagagcacggtg
actgaagcgcaagcagagcaactaacactcgccttcttgaagcagtgggtcccggaaaat
agctcacctatctgcggtaattctatcggccaggaccgtcgttttttggttaactacatg
ccagaactggaaaattactttcactatcgcgcgctggatgtcagtactctgaaggagtta
gcgcgccgttggaaacctgaaatcttgcaacagtttcataaaaaagggactcatcaagcg
cttgatgatattcgcgagtccattgccgaattagccttctacaaagaaaacttcttaaaa
ttatag
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