Tatumella sp. TA1: EFZ10_03735
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Entry
EFZ10_03735 CDS
T09934
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tatu
Tatumella sp. TA1
Brite
KEGG Orthology (KO) [BR:
tatu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tatu03400
]
EFZ10_03735
DNA repair and recombination proteins [BR:
tatu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EFZ10_03735
Archaeal homologous recombinant proteins
EFZ10_03735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
ABC_tran
NTPase_1
TsaE
AAA_22
AAA_21
cobW
Motif
Other DBs
NCBI-ProteinID:
QGX90826
LinkDB
All DBs
Position
complement(764175..767849)
Genome browser
AA seq
1224 aa
AA seq
DB search
MKILTLRLKNLNSLRGEWHIDFTQPPFRDNGLFAITGETGAGKTTLLDAICLALYHQTPR
LGGISPTQNQLMTRGTSDCLAEVEFEIKGEAWRAFWSQNRARNDHRGKLQPPKVELARCR
DNKIFADKVSDKLKLIETLSGLNFQRFTRSMMLSQGQFAAFLNAPVAERAELLEELTGTA
IYGKISQQVFEQHKLYKIELDQLQAKLSGVTLLSEPQREALQHQQHTLASERDTLQQQLE
QLTAALNWQHYQQQLHEHLMQGREALTATEQQALALAPLQEKLTAYQPAAQLLPAWQRLQ
QSTHAVEQARAQQHSLQQLVQQAEQQRLASYDNWQNKVQAEQQFQRQQHEQQQLLVDKVI
PLDERIKHLTQLQQQTEQQLQPLQSAYRECAEQLTLLTQQSQSHQQRIEVIDHWQQGYPT
LSAWGAHLVGWRHHAEQLLREQRAGQTVADQLAQRKQRLVRLGEERDQQRTLTEASQRGV
DQQSAALLALHQDNAAQDADNSFQALATWQREQGHLTPHLQQLSRWSDQWQAGVTTREQT
QRALQRSEQQLATLRQQHHAQSQQLASDKAQLVALEKLCVLEQQVADLQRLRDSLQDGDP
CVVCGSTDHPGHSIADGLATHPSHLAARDAQRACIEQGSQAVARLEADCENSQREAQHHR
ETLAQSDDALAALQMTWQTLTLAQGIDLALDDRQGLEQALALQLERQQHYQDALQAQQRR
QEERYRTEKALSQQQHHLQQQQQALALLDQQYQLEQQQLKEATQQAAAAQQTLQQDYDDL
LQQLAQYQLAPLPLSELVTTLDDYQKIWTTYQGYQQERLELEATRSTLSERLAALQREQT
QRSAEIQHQQQQLSAHKATTADCVNERHTLVGDQSVHQLRQSLNEQAQRLRDDEQQQRQL
WQQKQDRHQQISGEERQVATQLAALILQLQEAEALFNDALHASVFTDQAHFLDALLPESV
ITDYRQKLDQAAQQIDRAKTRLTQAERSLQQHQQAQPALASETAQHLVPQRDQQQQRYQA
VLVQQGEVTQQLLADDTLKQQQSTLVATIAERQDHLATWDQLNELIGSASGDKFRRFAQG
LTLEHLVWLANQQLERLHGRYRLQRTERDLLELQVVDQWQADECRDTKTLSGGESFLVSL
ALALALSDLMSDRNHIDSLFLDEGFGTLDSATLDAALDALDSLNASGKMIGVISHVEAMK
ERIPVQIKVKKVNGLGFSSLAISH
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattaacgttacgtcttaagaatttaaactcactgcgcggtgaatggcatatc
gactttacccaaccgccttttcgcgacaatggattatttgcgatcaccggtgaaacggga
gcgggcaagacaacactattggatgcgatatgcttagcgctctatcatcagacgccacgc
ttaggggggatctcaccgacccagaaccagctaatgacacgcggtaccagcgactgcctc
gccgaggtggagtttgaaatcaaaggagaagcttggcgcgctttctggagccaaaatcgt
gctcgcaatgaccatcgcggcaagctacagccgccgaaagtggaactggcacggtgtcgc
gataataagattttcgcggataaagtctcagataaactgaaattaatcgaaacgctgtcg
ggccttaacttccaacgttttacgcgctcaatgatgctatcccaagggcaattcgccgcc
tttcttaacgccccggtcgcggaacgcgcagagttgctggaagagttaaccggtaccgct
atctatggcaagatttcgcagcaggtcttcgaacagcacaaactctataagatcgaactc
gaccagctacaggctaagttgtcaggggttacgctactcagcgagccacagcgtgaggcc
ctgcaacatcagcaacatacgctggccagtgagcgcgatacccttcagcagcagctcgaa
cagttaacggcagcattgaattggcagcattatcagcaacagctccacgaacaccttatg
cagggccgtgaggcgcttaccgccactgagcagcaggctctggccttagccccacttcag
gaaaaactgactgcctaccaacccgctgcgcaattacttcctgcgtggcaaaggttacaa
cagtcgacccacgccgttgagcaggcacgcgctcagcagcatagcctgcaacaactggtt
cagcaggcggagcagcagcgactggccagttacgataactggcagaacaaagtgcaggcc
gaacagcagtttcagcgccagcagcacgagcagcaacagctcttggtcgataaagtgatc
cccctcgatgagcggatcaagcatctcacgcagttacagcagcagaccgagcaacagcta
cagccgctacagtcggcttatcgcgagtgtgcagaacagctcaccctgctcacgcagcaa
tcgcaaagccaccagcagcggattgaagtgatcgaccactggcaacaaggttatccgacg
cttagcgcttggggtgctcatttggtcggctggcgacatcacgctgaacagctgttacgg
gagcagcgcgcgggtcagacggtcgccgatcagctcgcacaacgaaaacagcgactcgta
cgtttaggtgaggaacgcgaccagcaacgtacactgaccgaagcctcgcaacgaggcgtt
gaccagcagtcagcggcgcttttagcattacaccaagataacgccgcgcaagacgcagac
aattcgtttcaggctttggccacttggcagcgcgagcaagggcacctaacgccccacttg
caacaactgtcgcgttggtcggaccagtggcaggcgggggtgacaacccgcgaacagacg
caacgcgcgcttcaacgtagcgaacaacaattagccacgctgcgtcagcaacatcatgcc
cagtcccagcaactcgccagcgacaaagctcagcttgttgccttagaaaaactctgtgtt
ttagagcaacaggtggcagatttacagcggctacgcgacagcctacaggatggcgacccc
tgtgtcgtatgcggatcgacggatcaccccggccactcaatagccgatggtcttgcgact
cacccgtcgcacctggcagcgcgtgatgcgcaacgcgcctgcattgaacagggctcgcaa
gcggtggctcgtcttgaggcagactgcgaaaacagccaacgagaagcccaacaccatcgc
gagacactggcgcaatcagacgacgctcttgccgcactccaaatgacgtggcaaacccta
acgttagcgcaagggatagatctggcactggacgatagacaggggcttgaacaggctctc
gccctgcaactcgagcgccagcaacactatcaagacgccttacaggcacagcagcgtcgc
caagaagagcgctatcgtaccgagaaggcgttatctcagcagcaacaccaccttcagcag
caacagcaagcattggcgcttcttgaccagcaatatcagttagaacaacaacagctcaaa
gaagccactcagcaggccgccgccgcccaacagacgttacaacaggattatgacgatctc
ctgcaacaactggctcagtatcagttagcaccgttaccgctcagcgagctggtcaccaca
ttagacgattatcagaagatctggacgacttatcagggctatcaacaagagcgcctcgag
cttgaggcgacacgtagcaccctaagcgagcgcctcgccgccttacagcgtgaacagacg
cagcgctctgccgagatacagcaccaacagcagcagttatcggcacataaagcgactacc
gctgactgtgtcaatgagcgtcacacgctggtgggtgatcaatccgttcatcagttacgt
cagtcacttaacgaacaagcgcaacgcctcagagacgacgagcagcagcagcgtcaactc
tggcagcagaagcaggaccgccaccaacagatcagtggtgaggaacgccaagtcgctacg
cagcttgccgctctaatattgcagttacaggaggccgaggcgctatttaacgatgcactg
cacgcctccgtctttactgatcaggcgcatttcttagacgcattattacccgagtcggtg
attaccgactatcgtcagaaactcgatcaggctgcacagcagatcgatcgcgctaaaaca
cgactcactcaggccgaacggtcgcttcaacaacatcagcaggctcagcctgcgctggcg
agtgagaccgcgcagcatctcgtgccccagcgcgaccagcagcagcaacgctatcaagcg
gtactcgttcaacaaggagaagttacccaacaattacttgcagacgatacgctcaaacag
cagcagtcgacgcttgtcgcgacgatcgccgaacgtcaagaccaccttgcaacgtgggat
cagctcaatgaattaatcggctctgccagcggcgataagttccggcgttttgctcaagga
ttaaccttagagcatttagtttggttagctaaccaacaactcgaacggttacatggccgc
tatcgtttgcagcgcacggaacgcgatctccttgaattacaagtggtcgaccagtggcag
gccgatgaatgtcgcgatacgaaaaccctctcggggggagaaagcttcttagtcagcctt
gccttagccctcgcgttatcggatctgatgagcgataggaaccatatcgactcactcttt
ttagatgagggattcggtacgctcgattccgccaccttggatgctgcactcgatgcactg
gatagcctgaatgcctcgggtaagatgattggggttatcagccatgtcgaggcgatgaaa
gagcggatccccgtacaaattaaagtaaaaaaagtgaatggattaggcttctcttcctta
gcgatcagccattaa
DBGET
integrated database retrieval system
