Tatumella sp. TA1: EFZ10_04325
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Entry
EFZ10_04325 CDS
T09934
Symbol
rlpA
Name
(GenBank) endolytic peptidoglycan transglycosylase RlpA
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
tatu
Tatumella sp. TA1
Brite
KEGG Orthology (KO) [BR:
tatu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tatu01011
]
EFZ10_04325 (rlpA)
Enzymes [BR:
tatu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
EFZ10_04325 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
tatu01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
EFZ10_04325 (rlpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
QGX90930
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Position
complement(875272..876447)
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AA seq
391 aa
AA seq
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MRKEWLGISLASLMLAACSSDQQQQNYTAPPLPAYNGPVVEIPGIEPKYEPRNSTANNNY
TVNGISYKIATDTQNFSQIGLATTYGADAQGNRTASGEAFDTDAFTAAHPTLPIPSYVRV
TNLANNRQIVVRINDRGPFIPGRIIDLSPAAATRLNTSNNSRVRIDVINVTPDGTLSGPG
TIGTRVAKQSYDLPARPDLDGGMTTSESAAPGGTALPPVTTPTAPTDTNVRAVDNSELQS
NGSSGAPVHSNGLQGAPQPLRSGVLESDEPQEAPAVTQPSAAPAVAAATVAASTPHTTPA
VNPPVTKPAASSHGSGKGFVVQVAAVNNAERANELQKKLAQHYNVAGHVEAVNGNVYRVQ
LGGYGSRGEATALQQRLAQDNLTSFVTSNNN
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaggaatggcttggaattagcttggcatcattaatgttagcggcgtgttcgtca
gatcagcaacagcagaattacaccgccccacctctgcctgcctataatggcccggtggtg
gagatcccaggtattgaaccgaaatacgagcctcgcaacagtaccgctaataacaattat
accgttaatggtattagttataagattgcgacggatacgcaaaactttagccaaattggt
ttagcgaccacttacggcgcggacgctcaaggtaatcgcaccgcctccggtgaagctttt
gatacggatgcattcaccgctgcgcacccaacattgccgatcccctcttatgttcgcgtg
accaatttagcgaacaaccggcagatcgtcgtgcgcattaatgaccgtggtccgtttatc
cctggacgtattattgacctctcccctgctgcggccacccgtttgaatacctcaaataat
agtcgtgtgcgcatcgatgtcattaacgttacccccgatgggacgctatcgggcccggga
accatcgggactcgagtcgcgaagcagagctatgatctgcctgcacgccctgatcttgac
ggcgggatgacgacgagtgaatcagccgcccccggtggcaccgcattaccccctgtcacc
acgccaactgcgcctacagataccaatgtacgcgccgtagacaacagtgaactgcaaagc
aatggaagtagcggtgcccccgtgcacagtaatggtctacaaggtgcgccgcaaccccta
cgcagcggcgtattagagtctgatgaaccgcaagaggcaccagcggtaacccaaccgtcc
gctgcacctgccgtcgctgcggcgaccgttgccgcctcaactccccataccactccagca
gtgaatccgccggtcaccaaaccggctgcatcaagtcatggtagcggtaaagggtttgtc
gtccaggttgctgcggtcaataatgcagaacgcgctaacgagttacaaaagaaactcgcg
cagcattacaatgttgccggacacgttgaagcggtaaatggtaacgtctatcgcgtacag
cttggcggctatggtagccgtggcgaagcaaccgcgctgcaacagcgcctcgcacaggac
aatctgacttcattcgttacttcaaataataactaa
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