Tatumella sp. TA1: EFZ10_06355
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Entry
EFZ10_06355 CDS
T09934
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
tatu
Tatumella sp. TA1
Pathway
tatu02020
Two-component system
tatu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tatu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EFZ10_06355
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EFZ10_06355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tatu03021
]
EFZ10_06355
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tatu02035
]
EFZ10_06355
Transcription machinery [BR:
tatu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EFZ10_06355
Bacterial motility proteins [BR:
tatu02035
]
Flagellar system
Flagellar assembly proteins
Stator
EFZ10_06355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QGX91284
LinkDB
All DBs
Position
1325154..1325870
Genome browser
AA seq
238 aa
AA seq
DB search
MQCLYNHEGLAHDEIDWPRYLKLVRQEALRLQVRLPASVELDDLIQAGAIGLMDALSRFD
AQQGTAFTTYAAQRIRGAMLDELRHRDWAPRRVRREARNVAAAIAHIEQHTGCTATEEQI
VARLDISREEYRTILMETNNTQLFSLDSLYDEHNDATEQLFAGTALDGPLDTLIEQNLRQ
QIVSAIAHLPEREQQVLSLYYQEELNLKEIGAVLGVGESRVSQIHSQAIKRLSSRLRE
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
gtgcaatgtctctataaccatgaagggctagcgcatgatgaaatcgattggccgcgatat
ttaaagttagtcagacaggaggcattacgtttacaagtccgtttgcccgcaagcgtcgag
cttgatgacctcattcaagcgggggcgattggcctgatggacgcgttatcacgattcgat
gcacagcaaggaacggcttttacgacctatgcggcgcagcgtattcgtggtgcgatgtta
gatgaattacgtcatcgcgattgggcacctcgacgtgtgaggcgcgaggcgcgaaatgtc
gcggcggcgatcgcgcatatcgagcagcataccggatgcaccgccactgaagaacagatc
gtcgcgagactagacataagtcgcgaagagtatcgtacgatacttatggaaaccaataac
actcaattattctctttggatagcctctacgatgagcataacgatgctactgagcaatta
ttcgctggcacggcgttagacggtccgcttgatacgctgatcgaacagaatttacgacaa
caaatcgttagtgcgatcgcccacctaccggagagagagcaacaagtattgagtctgtac
tatcaggaggaattgaacctgaaagagataggtgcggtattaggggtgggagagtcgaga
gtgagtcagattcatagtcaagccatcaagcgattgagtagtcgtttacgtgaataa
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