Tatumella sp. TA1: EFZ10_07145
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Entry
EFZ10_07145 CDS
T09934
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tatu
Tatumella sp. TA1
Brite
KEGG Orthology (KO) [BR:
tatu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tatu03016
]
EFZ10_07145
Enzymes [BR:
tatu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
EFZ10_07145
Transfer RNA biogenesis [BR:
tatu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EFZ10_07145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
QGX91426
LinkDB
All DBs
Position
complement(1497243..1499177)
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AA seq
644 aa
AA seq
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MLQDNPLLAQLKQTLHDQTPRVEGVVKGTDKGFGFLEVEGQKSYFIPPPQMKKVMHGDKI
SAVIHSNKDKESAEPEKLIEPFLSRFVGRIQKKDDRLSIIPDHPLLKEAIQCRAARGVDH
DFVAGDWAVAEMKRHPLKGDRGFYAELTEFITVGDDHLAPWWVTLSRHNLGRSAPEAELP
EFQPEQLERRDLTALEFVTIDSASTQDMDDALFTRELDNGQLSLTVAIADPTAWVMPNTP
LDDIAAERAFTNYLPGFNIPMLPRELSDDLCSLRPNVKRPVLACDIVIDSEGALVGQPAF
YAAWIESKAKLVYDNISDWLENSGEWQPESDAIAQQITLLQRFCSTRHQWRKTHALVFRD
RPDYRFVLGEKGEVLEIITEQRRVANKMVEEAMITANIVAGEVLRDQLGFGIYNLHSGFD
EQNAEQASAILANHGITVDPTAIATLEGFKVLRRRLDEEPTQYLDSRIRRFQSFAEIGTQ
AGPHFGLGLDAYATWTSPIRKYGDMVNHRLLKSIILNEQNAKPEEALTLRMSERRRQHRM
AERDVGDWLYARYLAPFAGTEQKFNAEIIDISRGGMRVRLADNGAVAFIPAPFIHAVRDE
LVLSQELGTALVKGEERYRVTDIIEVTIAEVRMETRSVVARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaagataatccgctgctggcgcagctaaaacagacactgcatgatcagactcct
cgtgttgagggtgtggtcaaaggaaccgataaagggttcggatttttagaagtagaaggc
caaaaaagctacttcattcccccgccgcagatgaaaaaagtcatgcatggcgacaaaatt
agcgcggtaatccactcaaataaagataaagagagtgccgagccagaaaaactgattgaa
cctttcctcagccgtttcgtgggtagaatccagaaaaaagatgatcggctatcaattatt
cctgaccatccgttacttaaagaagctatccagtgccgagccgctcgaggtgtcgaccat
gacttcgttgctggcgattgggctgtagcagagatgaaacgtcacccgctgaaaggcgat
cggggtttctacgctgagcttacagaattcattacggtcggagatgatcaccttgcacct
tggtgggtgacactgtcacgtcacaacctaggccgtagcgccccagaagctgagttacct
gaattccagcccgagcaattagagcgccgcgatctcaccgcccttgaatttgtgactatt
gatagcgcctcaacgcaggatatggatgatgccctattcactcgcgaactggataatggc
caactgagcctaactgtcgcgattgctgaccctacagcttgggtcatgccgaatacgccg
ttagacgatattgcagcagagcgtgcttttaccaactatctgcctggcttcaatatccca
atgttaccgcgtgagctgtctgatgacctctgctcattacggcctaacgttaagcggcct
gtgctcgcctgcgatattgttattgatagcgaaggtgctttagtcggtcagccagcgttt
tatgctgcatggattgagtcaaaagcgaaacttgtttatgacaacatttcggattggtta
gaaaacagcggtgagtggcagccagagagcgacgcgatcgcacagcaaattacgctatta
cagcgtttctgttcgactcgtcatcaatggcgtaaaacccacgcactagtattccgcgac
cgccctgattaccgctttgtactcggtgagaaaggtgaagtgctagagatcatcaccgag
caacgtcgtgtcgcgaacaaaatggttgaagaagcgatgataacggccaatatcgttgca
ggcgaagtacttcgtgaccaactcgggtttggtatctataacctacatagtgggtttgat
gagcaaaatgctgaacaagcaagcgccattctcgctaatcatggaattaccgtcgatcct
accgctattgcgacgctagaagggtttaaagttctccgccgccgtctggacgaagaacca
actcaatatcttgatagccgtattcgtcgtttccagtctttcgctgaaattggaacgcaa
gcaggcccgcacttcggtttaggtttggatgcctacgcgacatggacatcgccaattcgt
aaatatggtgacatggtcaaccatcgtttactgaagtcgattattctaaatgaacagaat
gctaaaccggaagaagccttaacccttcgtatgtctgagcgccgtcgccagcaccgcatg
gctgagcgtgatgtcggggattggttatatgcgcgttatttagcgccgttcgccggtact
gagcagaaattcaatgctgaaattatcgatatcagccgtggtggaatgcgtgttcgctta
gccgataatggcgctgtcgcatttattcctgcgccatttattcatgctgtgcgtgatgag
ctagtgcttagccaagagctgggtaccgccctggttaagggtgaggagcgttatcgggtg
acagatatcattgaagtcaccatcgccgaagtcaggatggaaacacgttcagtggttgcc
cgaccagtagcctag
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