Tatumella sp. TA1: EFZ10_11535
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Entry
EFZ10_11535 CDS
T09934
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tatu
Tatumella sp. TA1
Pathway
tatu03030
DNA replication
tatu03430
Mismatch repair
tatu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tatu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EFZ10_11535
03430 Mismatch repair
EFZ10_11535
03440 Homologous recombination
EFZ10_11535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tatu03032
]
EFZ10_11535
03400 DNA repair and recombination proteins [BR:
tatu03400
]
EFZ10_11535
Enzymes [BR:
tatu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EFZ10_11535
DNA replication proteins [BR:
tatu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EFZ10_11535
DNA repair and recombination proteins [BR:
tatu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EFZ10_11535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QGX92198
LinkDB
All DBs
Position
complement(2357474..2360956)
Genome browser
AA seq
1160 aa
AA seq
DB search
MANPRFIHLHVHSDYSMIDGIAKTGALVKKAASSGMPALGITDHMNLCGLVKFYGSAQGA
GVKPIIGADLNIINPLLGDEPMQLTVLAANNDGYQNLTLLISKAYQRGYGHQGPIVDQEW
LVEHASGLILLSGGFKGDVGYSLLRGNTALAQQCLAFYQEHFADNYYLELTRTGRSEEES
YLHQALSLAVAHHIPVVATNDVCFLSEQDFDAHEIRVAIHDGYTLDDPKRPKLYTEQQYL
RTEEEMCELFADIPEALANSVEIARRCNVTIRLGEYFLPQFPTGEMTTADFLVSCSKAGL
EERLLFLFPDEQERAAKRLAYDERLDIELTVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLEKAFIAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDELGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALQMINARRERQGEPPINIDAIPLNDKKSFDML
QRAETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHESLQPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFKDGAESMGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINAGLYPFHVNNEGEIVYGIGAIKG
VGEGPIEAILEARNQGGYFKELFDLCARTDIKKINRRVMEKLIMSGAFDRLGPHRAALMS
ALNDALKAADQHSKAEAIGQGDMFGVLAEEPEQIEQSYASINRWPEQVQLDGERETLGLY
LTGHPINQYLKEIERYVGGMRLKDMHPTERGKITVAAGLVLAARVMVTKRGNRIGICTLD
DRSGRLEVMLYTDALDKYQQLLEKDKILIVSGQVSFDDFSGGLKMIAREVMDIDEAREKY
ARGLALSLTDRQIDDQLLNRLRQVLEPHRSGTIPVNLYYQREDARAKLRFGATWRVTPSD
RLLNDLRLVIGTEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccaacccacgttttattcacctccatgttcatagcgactattccatgatcgatggt
atagccaaaactggtgccctagttaagaaagctgcgagttcaggtatgccagctttgggg
atcaccgaccatatgaacttgtgcgggctggtcaaattctacggttctgcacagggtgct
ggtgtcaaaccaattatcggtgccgatcttaatattattaatcctttgctcggtgatgaa
ccgatgcaattgacggtacttgctgccaacaatgatggataccagaatcttactctactc
atctcaaaagcgtaccaacgtggctatggtcatcaggggccgatcgttgatcaagaatgg
ctggttgagcatgcctcaggtttaatcctgctatcgggcggctttaaaggtgatgttggc
tatagtttattaagaggaaacacggcacttgcacagcaatgcctagccttttaccaagag
cactttgcggataattattacctcgagttgacgcgtactgggcgtagtgaagaagagagt
tatttacaccaagccttatcccttgcggttgcacatcatatcccggtagtggcgactaat
gatgtctgttttcttagcgagcaggatttcgacgcccatgaaattcgcgttgcgattcat
gatggctacactcttgatgatcctaagcggcctaagctctacaccgagcagcagtatctg
cgtaccgaagaggagatgtgtgagttatttgccgatatcccagaagcgcttgcgaatagc
gtagaaatcgctcggcggtgtaacgtcacgatccgcctaggcgaatattttctcccacaa
tttccaacgggtgaaatgaccaccgcagatttcttagtgagttgttctaaagcaggattg
gaggaaaggctcctatttttattccctgatgaacaggagcgcgcggctaaacgtcttgcc
tacgatgaacgtttagatatcgaactcaccgttattaaccagatgggctttccaggttat
ttcttgatagtcatggaattcatccagtggtcgaaagataacggcgtacccgttgggcca
ggtcgtggctcgggcgcaggctcgttggttgcttacgcgctaaaaattacagatttggat
cccctggagtttgacctactattcgaacgattcctcaatcctgaacgcgtgtcaatgccc
gatttcgacgtcgatttctgtatggagaaacgcgatttagtcattgaacacgttgcggat
atgtatggacgcgacgcggtttcgcagattattacgttcggtacgatggcggcaaaagca
gtaattcgcgatgttggccgagtcctcgggcatccttacggcttcgtcgaccgtatttcg
aaattaattcctcccgatccggggatgacgctagaaaaagcgtttatcgccgaacctcaa
ttaccagaaatttatgaggcagatgaagaggtcaaagcgcttatcgacatggcgcgtaag
cttgaaggcgttactcgaaatgcaggtaagcacgcaggtggagtggtcatcgcgccgaca
aagattactgactttgcgccgctttattgcgatgaattagggcaacatccggtcacgcaa
tttgataaaaacgacgtagaatatgcagggttggttaaatttgacttcctgggtttacgg
acgttaaccattatcaactgggcattacaaatgattaatgcgcggcgtgagaggcaaggc
gagccacctatcaatatcgatgctattccgctgaatgataaaaaaagtttcgatatgctg
caacgggctgaaacgacagcggttttccagttagaatcccgtggcatgaaggatctcatt
aaacggctgaagcccgactgtttcgaagatatgatcgcattagtggctttgtttcgtcca
ggtccattacagtccggtatggtagataactttatcgatcggaaacatgggcgtgaagct
atctcatatcccgatatccaatggcagcacgaaagtttacagccggtattggagcctacc
tacggtattattctttaccaagaacaggttatgcagatcgcgcaagtactttccggttat
accttaggcggggcagatatgctgcgccgggcaatgggtaaaaagaagccggaggagatg
gctaagcagcgttcagtgtttaaagacggtgccgagagcatgggtgtcgacggcgagtta
tcgatgaagatcttcgatctcgtagagaagtttgccggttatggatttaacaaatcgcac
tctgcggcttatgcgctggtctcgtatcaaaccctttggcttaaagcccattatcctgca
gaatttatggctgcggtcatgactgcggatatggataatactgaaaaagtcgttggccta
gtcgacgaatgttggcgtatggggctgaaagtgttgccccccgatattaatgccggactt
taccctttccatgttaacaatgaaggcgaaattgtttatggtatcggtgcaataaaaggc
gtcggcgagggtccaatcgaagcaatacttgaagctaggaatcaaggcggttattttaag
gagctgtttgatctctgcgcgcgcacggatatcaaaaaaattaatcgccgtgtgatggaa
aaactgataatgtccggtgccttcgaccgattaggaccacatcgggcggcgttaatgagt
gcactgaatgatgcacttaaggcagcagaccaacactcgaaggctgaggcgataggacag
ggcgatatgtttggggttcttgcagaagagccagagcaaatcgagcagtcttatgccagt
ataaatcggtggccagaacaggtacagttggacggtgaacgagaaacgttagggttgtat
ctcaccggtcatccgatcaatcagtatttgaaggaaattgagcgttatgtgggtggaatg
cgtctcaaagatatgcatcctaccgaacgtgggaagataactgttgcggcgggattagtc
cttgcggcaagagtgatggtcaccaaacgtggtaaccgaattggtatttgtacgctggat
gatcgttctggtcgtttagaggtaatgctctatactgacgcgctagataaatatcagcag
ttgttagaaaaagataaaattctgatcgtcagtggacaggtcagtttcgatgatttctct
ggtggtctaaaaatgattgcaagagaagtgatggatattgatgaagctcgcgaaaaatat
gctcgtgggcttgctctctcactgactgacaggcaaattgatgaccagcttttaaaccgt
cttcgacaggttcttgaacctcaccgttcaggaacgattcctgtaaacctctattatcaa
cgagaggatgcgcgggcgaaattacgatttggggccacttggcgagttacgccaagtgat
cgtttactcaacgatctacgcctcgtaatcggaacggagcaggttgaactggagtttgat
taa
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