Tatumella sp. TA1: EFZ10_11685
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Entry
EFZ10_11685 CDS
T09934
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tatu
Tatumella sp. TA1
Brite
KEGG Orthology (KO) [BR:
tatu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tatu03016
]
EFZ10_11685 (thpR)
Enzymes [BR:
tatu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EFZ10_11685 (thpR)
Transfer RNA biogenesis [BR:
tatu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EFZ10_11685 (thpR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QGX92228
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All DBs
Position
2394905..2395471
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AA seq
188 aa
AA seq
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MLIRNVVVFAKTIQADHYFLALTLPDSVTEQLVTWRATALPADEGIPLPKAQLYMVLAWI
NSPNAAQLSQLHPAIAALRSPAFTFTLNDAGYWPRSGQCWVGCRPAPRELLQLAALLRSR
VARIGCPQSSLPFHPHVTLLRQVPSSLTLPKRNFSWSVACNHFSLFSSRYQRSRRIITLE
NTYPLSPN
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atcttaataaggaacgttgtggttttcgccaaaacaatccaagcagatcattacttctta
gcactgacactacctgactcggtcaccgaacaattggtcacgtggcgtgcaaccgcttta
cctgcggatgaggggatcccactcccgaaagcacaactttatatggttctagcatggata
aattcacccaacgccgcgcaacttagtcagttgcaccccgccattgctgccctgcgttcc
cccgcgtttaccttcacacttaacgacgccggatactggccgcgttcaggacaatgctgg
gtggggtgccgtcctgcaccgcgtgagctactacaattagccgcgctactgcgttcgcgc
gtcgcgcgtatcgggtgtccgcagtcttctctgccctttcatccccatgtcacgctgttg
aggcaagttccatcctccttgacgctgcccaaacggaatttctcatggtctgtggcctgt
aaccatttctccctcttcagcagccgttatcagcgaagtcgacggatcattactctcgaa
aacacttatccactgtcgcccaattag
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