Tatumella sp. TA1: EFZ10_11965
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Entry
EFZ10_11965 CDS
T09934
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tatu
Tatumella sp. TA1
Pathway
tatu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tatu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EFZ10_11965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tatu03400
]
EFZ10_11965
Enzymes [BR:
tatu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EFZ10_11965
DNA repair and recombination proteins [BR:
tatu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EFZ10_11965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
Viral_helicase1
UvrD_C_2
AAA_11
Helicase_RecD
AAA_22
SH3_13
SLFN-g3_helicase
UvrD-helicase
DEAD
nSTAND3
FtsK_SpoIIIE
TrwB_AAD_bind
AAA_16
AAA_28
HerA_C
AAA_33
UvrD_C
ResIII
CbiA
AAA
SRP54
Mg_chelatase
DUF87
DO-GTPase1
T2SSE
PhoH
AAA_7
C5_CUB
NTPase_1
AAA_24
Motif
Other DBs
NCBI-ProteinID:
QGX92277
LinkDB
All DBs
Position
complement(2453661..2455502)
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AA seq
613 aa
AA seq
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MNPLDKVMSYAHTAQLFRPVDLQFARLVCGGERADYFLAAACVSASAGEGHVCIDLASLT
PAGLWAGSQRVAAEGLWQLCEAPMEAEVWQRQLEHWPALSSPTHRGPLCLVDHQLYLQRA
WQYEQQVAAFFNAFPEQQVDDEAQARLILDRLFGEASHNDQKVAAAVALTARHAIISGGP
GTGKTTTVAKLLAAMIQLSPSKLRIQMAAPTGKAAARLTESLGKALLGLEVDDAVRQRFP
REATTLHRLLGAQATTRQLRYHAQNPLHLDVLIVDEASMVDLTMMANLIAALPASARIIF
LGDRDQLASVEAGAVLGDICRSAEYGYSRARAAQLTRLTGCVIAGNDLSDAPRLRESICL
LTHSYRFDGDSGIGQLAKAVNQGDSRQAQALLAGEHRDIHWRTLADEGGWQTLLTEICQG
YQPFLAAIASGSSPHKVVSDFGHYQVLCALREGAFGVKGLNQSIETALRQRGLLPPLPPT
QQAYVGRPIMITRNDSSLGLFNGDIGITLLDDEQQLKVYFQLPSGELRAVQPSRLPEHET
AWVMTVHKSQGSEFTHTALVLPRQFSPVLSRELIYTAITRAKSQLTLYGEASMVSRAIAN
QTSRRSGLTAALR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgcttgataaggtgatgagctatgcgcacaccgcgcagctgttccgaccggta
gacctacaatttgcgcgccttgtctgtggtggcgaacgagcggattattttctcgccgcg
gcctgtgtcagcgccagcgcgggtgaggggcatgtctgcatcgatttagcttccctaacg
cccgcaggattatgggcggggtcgcaacgtgtcgccgctgaaggattatggcaactctgc
gaggcccccatggaggcagaggtatggcaacgccaattagagcattggccagcactctct
tcgccgacgcacagggggccgctatgcttggtcgaccaccagctctatttgcaacgagcc
tggcagtatgaacagcaagtggcggccttttttaacgcttttcctgaacaacaggtcgat
gatgaagcgcaggcacggctgatcttggaccgattgtttggtgaggcgtcgcataacgat
cagaaagtcgcggccgctgtcgcgctaaccgcgcgccatgcaattatctccggcggtccg
gggacaggaaaaacgacgacggtcgcaaagctactggcggcgatgatccagctcagcccc
agtaaactacggatccagatggcggcccccaccggtaaggcggccgctcgactcaccgag
tcgctgggcaaggcactccttggccttgaggttgacgacgcggttcgccagcgttttcct
cgcgaagcgacaacgctacaccgtttattgggcgcacaggcaacaacgcgtcagctgcgt
taccatgcacaaaaccccttacatctcgacgtattaatcgtcgatgaagcctcaatggtc
gatttaacgatgatggcgaacctgatcgcagctttaccggcaagcgctcgcattattttc
ttgggcgatcgcgatcagcttgcttctgtcgaggcgggggcggtgctcggcgatatctgt
cgtagtgccgagtatggctatagtcgtgcgcgtgcggctcagcttactcgcctcaccggc
tgtgtgatcgcagggaatgatcttagcgatgcaccaagacttcgagagagtatctgctta
ctgacgcacagctatcgattcgatggcgattcaggtatcgggcagctcgcgaaggcggta
aaccaaggtgatagccgtcaggcgcaggctttgctggccggagagcatcgcgatatccac
tggcgtaccttggcggatgaagggggctggcaaacactactaaccgaaatttgccaaggc
tatcagccctttttagcggcgatagccagtggctcttcgccgcataaagttgtgtcagac
ttcggccactatcaggtgctgtgtgccttacgggaaggtgcgttcggggtgaaaggtctt
aaccaaagtatcgagactgcattacggcaacgtgggctattgccaccgcttcctcctacg
caacaggcgtatgtcgggcggccaattatgatcacgcgtaatgatagtagcctagggcta
tttaacggcgatatcggcatcacgctgttagatgatgaacagcaattaaaggtctatttt
caattaccgagtggcgaactgcgggccgtacagccctcgcgcttacccgaacacgaaacc
gcttgggtgatgacggtccataagtctcaaggctccgagtttacgcacacagcgttggtg
ctaccgcgtcagtttagtcccgtgctctcaagagaacttatctataccgccattacccgt
gccaaatcgcagttaaccctctatggtgaggcaagtatggtcagccgtgcgatagccaac
caaacctcccgccgtagtggattaacggctgcgctgcgttag
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