Tatumella sp. TA1: EFZ10_12190
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Entry
EFZ10_12190 CDS
T09934
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
tatu
Tatumella sp. TA1
Pathway
tatu00521
Streptomycin biosynthesis
tatu00523
Polyketide sugar unit biosynthesis
tatu00525
Acarbose and validamycin biosynthesis
tatu00541
Biosynthesis of various nucleotide sugars
tatu01100
Metabolic pathways
tatu01110
Biosynthesis of secondary metabolites
tatu01250
Biosynthesis of nucleotide sugars
Module
tatu_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
tatu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EFZ10_12190 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EFZ10_12190 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
EFZ10_12190 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EFZ10_12190 (rfbB)
00525 Acarbose and validamycin biosynthesis
EFZ10_12190 (rfbB)
Enzymes [BR:
tatu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
EFZ10_12190 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
QGX92317
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All DBs
Position
complement(2510773..2511855)
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AA seq
360 aa
AA seq
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MRIAVTGGAGFIGSEVVRQIIEHTTHQVLVIDALTYAGNLHSLSSVASHPRYRFSHTSIG
DRPAITQLFSEFQPQVVMHLAAESHVDRSISGPDNFIESNILGTFELLEATRHYFQQLPE
TEQATFRFHHISTDEVFGDLAHSDDFFTEQTPYAPSSPYSASKAASDHLVRAWHRTYQLP
VIVTNCSNNYGPYQFPEKLIPLVILNALQGKPLPIYGMGEQIRDWLYVADHARALLCVAL
EGKVGETYNIGGHNEKRNIDVVNSICQLLDERFPDKPQGIDSYTQLIQFVTDRPGHDKRY
AIDATKIAQQLNWHPLETFESGLRKTVDWYLANPEWWQAVLDGSYATLTTSASQVEGVQL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagaatagcggttactggcggcgcaggctttatcggctccgaggttgtgagacaaatc
attgaacacacgacgcatcaggtattagtgattgacgcgttaacgtatgcggggaacctt
cattcgctcagctcggttgccagccatcctcgctatcgctttagtcatacttctattgga
gacagaccggcgattactcagctattcagtgaattccaaccgcaagttgtgatgcacctc
gccgcagagagtcacgttgatcgctctatctctggacccgataactttatcgagtcgaat
atcctcggtaccttcgaattactagaagcgacacgtcactattttcaacagcttcccgaa
accgagcaggcaactttccgcttccatcatatctctaccgatgaagtgtttggcgattta
gcgcatagcgatgacttcttcactgagcaaacgccttatgcgccaagtagcccctattcg
gcgtcgaaagcggctagcgaccatctagtacgtgcctggcatcgtacttaccagctaccg
gtgatcgtaactaactgttcaaataattacgggccttatcagtttcctgaaaaattaatt
ccactggttatcctcaatgcattacagggtaaaccgttaccgatttacggtatgggagaa
cagatccgcgactggctctatgttgccgaccatgcgcgggcgctactctgtgtcgccctc
gaagggaaagttggtgagacctacaatatcggcggtcataacgagaagcgcaatatcgat
gtggtaaacagtatctgccaattgctcgacgagcggttcccggataaacctcaaggcatc
gacagttatacacaactgatccagtttgttaccgatcgtcctggacacgataagcgctac
gcgatcgacgcgaccaaaatcgctcagcagctgaattggcacccgctggaaaccttcgag
tccggtttacgtaaaacggtagactggtatctcgcgaatccagagtggtggcaagcggtt
ctcgatggcagctatgcgacgttgacgacgagcgcttctcaagtggaaggagtccaacta
tga
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