Tatumella sp. TA1: EFZ10_14120
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Entry
EFZ10_14120 CDS
T09934
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
tatu
Tatumella sp. TA1
Pathway
tatu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tatu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EFZ10_14120 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tatu03400
]
EFZ10_14120 (uvrA)
DNA repair and recombination proteins [BR:
tatu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EFZ10_14120 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EFZ10_14120 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_25
AAA_23
NACHT
Viral_helicase1
nSTAND3
T2SSE
cobW
DUF1924
ScfRs
Motif
Other DBs
NCBI-ProteinID:
QGX92662
LinkDB
All DBs
Position
2914221..2917049
Genome browser
AA seq
942 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLTIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PTHHQPLAAQTVSQMVDQVLQQPEGQRLMLLAPIIKDRKGEHVKTLESLAAQGYIRARID
GEVCDLSDPPKLELQKKHSIEVVVDRFKVRDDIGTRLAESFETTLTLSGGTAIVADMDDS
KAEELLFSANFACPVCGYSMRELEPRLFSFNNPAGACQTCDGLGVQQYFDPERVIQNREI
SLANGAIRGWDRRNFYYYQMLRSLSDHYKFDVEAPFESLDAETQKVILYGSGKTNIEFKY
VNDRGDTSVRRHPFEGVLHNMERRYKETESNAVREELAKFISNCACSSCHGTRLKEEARN
VFVTEKTLPEISEMSIGHASDFFEHLALSGQKAQIADKILKEIRERLGFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLSTLIHLRDLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGSVVAEGNVHQIMANEASLTGQYLSGKKAIEV
PKERVKADPEKTLRIAGARGNNLKNVTLSLPVGLFTCVTGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYHEVKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPVRELFAGVPE
ARSRGYTPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDQCQGKRYNRETLEIKY
KGKNIHEVLDMTIEEAKDFFEAVPALARKLQTLISVGLSYIRLGQSATTLSGGEAQRVKL
SRELSKRGTGQTLYILDEPTTGLHFADIQQLLVVLHQLRDQGNTIVVIEHNLDVVKTADW
IVDLGPEGGSGGGEILIAGSPETVAECEQSHTARFLKPLLNK
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgaagtacggggtgcacgaacccataatttaaaaaatatcaacctcacc
atccctcgtgacaagctagtggttgtcactggtctttctggatcaggtaaatcctcgctg
gccttcgataccctttacgccgaaggacagcgccgctacgtcgaatcactctcggcctat
gcgcggcaatttctttcattgatggaaaagcccgacgtcgatcatatcgaggggctctcc
cccgctatttcgatcgaacaaaagtcgacatcccataacccgcgctcgaccgtggggacc
atcaccgagatccatgactatctgcgactcctcttcgcacgggtgggggaacctcgctgc
ccaacgcaccatcagcctcttgcggcccaaacggttagccagatggttgaccaagtatta
caacagccggaaggacagcggttaatgttgctcgccccaatcattaaagatcgtaagggt
gagcacgttaagacgctagaaagccttgcagcgcagggctacattcgtgcacggatcgat
ggcgaagtctgtgatctttccgatccacctaaacttgagttacaaaagaagcatagcatc
gaagtggtcgtggatcgttttaaggttcgcgacgacatcggtacgcgcttggcggaatcc
ttcgagaccaccctcaccttatcaggcggcaccgcgattgtagcggatatggacgatagc
aaagccgaagagctgctcttttccgcgaactttgcctgtcctgtgtgtggctatagcatg
cgtgagctggagcctcgtctcttctcgtttaataacccggcgggcgcgtgccagacttgt
gatggcctaggcgtgcaacaatatttcgatcctgaacgcgtgatccaaaaccgtgaaatt
tcgttagcgaacggtgctattcgcggctgggatcgtcgtaacttctattattaccagatg
ctacgctccctcagcgatcactataaattcgatgtcgaagccccttttgaatcgctagat
gcagagacgcagaaagtgattctgtatggttcgggtaaaaccaatatcgaatttaagtat
gtcaacgatcgtggggatacctccgttcgacgccaccctttcgaaggcgtgttacacaat
atggaacggcgctataaagagaccgaatcgaacgcggttcgtgaagagttagcgaagttt
attagcaactgtgcgtgtagcagctgccacggtacgaggttgaaagaagaagcgcgtaac
gtcttcgttacggagaagacattacccgagatatcagaaatgagcatcggccacgcgagc
gacttctttgaacacttagcgctgagcggtcagaaagcgcaaattgccgacaagatccta
aaagagatccgtgagcgcctaggcttcctggtcaatgtcggcctgaactacttatcgtta
tcccgttcggcagagacgctgtccggcggcgaagcacagcgtatccgcttagccagccaa
attggtgcggggctggtcggcgtgatgtacgtccttgatgagccttctatcggtctacat
caacgcgataatgaacgattactgagcacccttatccacctacgtgacttggggaatacg
gtcatcgtggtagaacacgatgaggatgcgatccgtgccgccgaccatgtcatcgatatt
ggcccaggggccggtgtgcatggtggatctgtcgtcgccgaaggcaatgtacatcagatt
atggctaatgaggcctctctgaccggtcaatacctgagtggtaagaaggctatcgaagtg
ccaaaggagcgcgtgaaggctgatcccgagaaaacattacgcatcgctggcgcacgcggt
aacaatttaaaaaatgtcacactatcactgcctgtcgggctcttcacttgtgtcacaggg
gtatcggggtccggtaaatcgacgttgatcaacgatacgctcttcccgatcgcccagcgt
cagctcaatggtgcaacgatcgccgagcctgctccttaccatgaggtgaaggggctggaa
catttcgataaagtgatcgatattgaccaaagcccgatcggtaggacaccacgatccaac
ccagcgacctataccggtattttcaccccggtacgtgagctatttgctggcgttcctgaa
gcacgctcgcggggttatactccgggtcgtttcagtttcaatgttaagggtgggcgctgc
gaggcatgtcagggcgatggcgtcattaaagtggagatgcacttcttaccagacgtgtat
gtcccatgtgatcaatgccaaggtaagcgttataaccgcgagacactggaaataaagtat
aaagggaagaacattcacgaagtgctggatatgactatcgaagaggctaaagactttttc
gaggcggttcccgcgctcgcccgtaaattgcagaccttaatcagtgtagggctctcttac
attcgcttaggccagtcggcgacgaccttatctggcggtgaagcacagcgggttaagtta
tctcgcgagctctctaaacgtggcactggccagacgctgtatattctcgacgaaccgacg
actgggctacattttgccgatatccaacagctgttagtggtcctccaccagctgcgagat
caggggaataccattgtcgtgatcgaacataacctggatgtggtaaaaactgcagactgg
attgtcgacctcggccctgaaggcggtagtggtggcggtgagatcctgatcgctggatcg
ccagagacggtcgcggaatgtgaacagtctcataccgcacgcttcttgaaacctttactc
aacaaataa
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