Trichoderma atroviride: 25774915
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Entry
25774915 CDS
T10217
Symbol
TrAtP1_011305
Name
(RefSeq) uncharacterized protein
KO
K10752
histone-binding protein RBBP4
Organism
tatv Trichoderma atroviride
Pathway
tatv03082
ATP-dependent chromatin remodeling
tatv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
25774915 (TrAtP1_011305)
03083 Polycomb repressive complex
25774915 (TrAtP1_011305)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tatv03036
]
25774915 (TrAtP1_011305)
Chromosome and associated proteins [BR:
tatv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
25774915 (TrAtP1_011305)
Histone modification proteins
HAT complexes
HATB complex
25774915 (TrAtP1_011305)
HDAC complexes
Sin3A-HDAC complex
25774915 (TrAtP1_011305)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
25774915 (TrAtP1_011305)
PRC2.2
25774915 (TrAtP1_011305)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
25774915 (TrAtP1_011305)
Heterochromatin formation proteins
Other heterochromatin formation proteins
25774915 (TrAtP1_011305)
Chromatin remodeling factors
NuRD complex
25774915 (TrAtP1_011305)
NuRF complex
25774915 (TrAtP1_011305)
NuRF complex (fruit fly)
25774915 (TrAtP1_011305)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WDR55
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
WD_LRWD1
MIOS_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
25774915
NCBI-ProteinID:
XP_013939973
UniProt:
G9P7Z3
LinkDB
All DBs
Position
6:join(2180727..2180763,2180840..2180893,2180965..2181016,2181076..2181591,2181651..2182136,2182206..2182380)
Genome browser
AA seq
439 aa
AA seq
DB search
MAPQGSELDPPDVDMVHDEEDDQEERLINEEYKTWKKNSPFLYDMILGTALTWPTLTVQW
FPDVKEPEGKNYRMHRLLLGTHTSDGSANLLQIADVQIPKAVVPNPDDYDEERGEIGGYG
KAGDVAALKCDIVQRIEHPGEVNKARYQPQNPDIIATLGVDGRILIFDRTKHPLQPASLG
KVNAQIELIGHKEEGFGLNWNPHEEGCLASGSEDTTMCLWDLKLLEADSRILQPTRRYTH
HARIVNDVQYHPISKNFIGSVSDDQTLQIVDVRQSEMHKAAVVAKQGHLDAINALAFNPK
SEVLVATASADKTIGIWDLRNVKEKVHTLEGHNDAVTSLAWHPTEAGILGSGSYDRRIIF
WDLSRVGEEQLPDDQDDGPPELLFMHGGHTNHLADFSWNPNEPWLVASAAEDNLLQIWKV
AESIVGKDDGDLPVDELDR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcaaggctctgagctcgaccctcccgatgtcgatatggttcatgacgaggaa
gacgaccaagaggaacgtctcatcaatgaggagtacaaaacatggaagaaaaacagtcca
ttcttatacgacatgattcttggaacggccctgacttggccaactctaacagtccaatgg
tttcctgacgtcaaagagccagagggcaaaaactatcgcatgcaccgtctcttgctcgga
acccacacctctgacggcagcgccaacttgctccaaatcgccgatgtccagatacccaaa
gctgtagtaccgaaccctgacgactatgacgaggaacgaggcgagattggaggctacgga
aaggcaggcgatgttgctgccctcaagtgcgatattgtacaaagaattgagcatccggga
gaggtcaacaaggctcgctatcagcctcaaaacccagacatcatcgccactcttggtgtt
gatggcagaattctcatctttgatcggacaaagcaccccttacaacccgcatcgctaggc
aaagtgaacgcacagattgaattaatcggccataaggaggaaggttttggcctcaattgg
aatccccatgaggaaggatgcctcgcttcaggcagtgaggatacgaccatgtgtttgtgg
gatttgaagcttcttgaagccgactcaaggatattgcaacctactcgcagatatactcat
cacgcccgaattgtcaacgacgttcaataccaccctatttctaagaacttcatcggctcc
gtatcggacgaccagaccctgcaaatcgtggatgtgcgacagagcgagatgcataaggct
gctgttgtcgcaaagcaaggccatttggatgccatcaatgcgctagcatttaatccaaag
tctgaagtccttgtggccacagcttccgccgataagacgatcggaatctgggatctacga
aatgtgaaggagaaggtgcacaccctcgagggccataatgacgcggtaacatccctcgcc
tggcatcccaccgaagccggcatcttgggaagtggcagttatgaccggagaattatcttc
tgggacttgtctcgcgtcggtgaggaacaacttcccgatgaccaggacgacggccctcct
gagctgctattcatgcatggcggccatacaaaccacttggccgacttcagctggaacccc
aatgagccttggttggttgccagtgccgccgaggacaacctgctacaaatttggaaagtt
gcggaatctattgttggaaaagatgatggcgacttgccagttgatgagcttgaccgatag
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