Trichoderma atroviride: 25774927
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Entry
25774927 CDS
T10217
Symbol
TrAtP1_004517
Name
(RefSeq) uncharacterized protein
KO
K14791
periodic tryptophan protein 1
Organism
tatv Trichoderma atroviride
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tatv03009
]
25774927 (TrAtP1_004517)
Ribosome biogenesis [BR:
tatv03009
]
Eukaryotic type
90S particles
Other 90S particles
25774927 (TrAtP1_004517)
Pre-60S particles
Other pre-60S particles
25774927 (TrAtP1_004517)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_RFWD3
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
WD40_Gbeta
Beta-prop_DCAF4
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_Aladin
Beta-prop_EML
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_ACSF4
Beta-prop_RIG_1st
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
25774927
NCBI-ProteinID:
XP_013939492
UniProt:
G9P449
LinkDB
All DBs
Position
2:join(5155414..5155664,5155726..5157097)
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AA seq
540 aa
AA seq
DB search
MSSMITAAQWVPRGFAAQFPQVYKLDESEFDRIAALAKLQLDDAEEDLKEAQEEGEDAEE
GDENNDEDMAGEEDKENKAGSTVKIDDDDLKEYDLEHYDDDEDDDNAPAANGSMGMFGNV
KSLAYYESNKEDPYITLQDDDEDEERQDLQVLATDNLILSAKVEDELAHLEVYVYEDESD
NLYVHHDIMLPAIPLCVEWLDIPVSNSGDAAKDGKGNFVAVGTMDPDIEIWDLDTVDCMY
PNAILGQGANPESGEKKKKKKKKAKANDEYHVDAVLSLAANRQHRNLLASASADKTIKLW
DLNTTKCAKSYSYHTDKVCSLAWHTAQPTVLLSGSYDRTVVAADMRAPDAKVPRWGVESD
VENIRWDPHDQNYFYVSTENGVIHYHDIRNAPSTPEATKAVWTLQAHDESVSSFDINSVI
PGFMATGSTDKTVKLWNIQASGPSLVVSRNLDVGKVFATSFAPDPEVAFRLAVAGSSGSM
HVWDTSTNPGVRSAFGQRVPALKEGVSEDRLVGVNDDESSSSEDEGEAENNEGGDSMDED
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccatgataactgctgcccagtgggtaccgcgaggcttcgcggcccaattcccc
caagtttacaagcttgacgagtccgaattcgacagaatagctgcattggccaagctgcag
cttgacgatgcagaggaggatttgaaggaagcgcaagaggaaggcgaagatgcagaggaa
ggagatgagaacaatgacgaggacatggcgggagaggaagacaaagaaaacaaggccgga
tctacagtcaagatcgacgatgatgatctgaaagagtacgatctagaacactacgacgat
gacgaagacgacgacaatgcgcccgctgccaacggaagcatgggcatgtttggaaatgtc
aagtcactggcatactatgaatccaacaaggaagacccgtacatcacactacaagacgac
gacgaggacgaggagaggcaggatctccaggtcttggcaactgacaacctgatcctgtct
gcaaaggttgaagacgaattggcacatctggaggtttacgtctacgaggatgagagcgac
aacctctacgtccaccacgacattatgctgccagccatccctctatgtgtagagtggctg
gacattcccgtcagcaactcgggagacgcagccaaagatggcaagggcaactttgtcgcc
gtcggcaccatggacccggatattgagatttgggaccttgacacagtcgactgcatgtat
cccaacgccatccttggccaaggcgcaaaccccgagtctggcgagaagaagaagaagaaa
aagaagaaggccaaggcgaatgacgagtaccacgtggatgccgttctgtctctcgccgcc
aaccgccagcaccgaaacctgctggcttccgcctccgcagacaagaccatcaaactctgg
gatctcaacacaaccaagtgcgccaagtcatactcgtaccacaccgacaaagtgtgctct
cttgcctggcacaccgcccagcctactgtgctgctcagtggaagttacgatcgaaccgtg
gtggccgccgatatgcgagccccagacgcaaaggtccctcgatggggcgtcgagagcgat
gtcgagaacatccgatgggacccgcacgaccagaactacttttacgtctcaacagagaac
ggcgtcattcactatcacgatatccgcaatgcgccatcaactccggaagcaaccaaggcg
gtctggaccctgcaggcacacgacgaatctgtgtcgtcatttgacatcaacagcgtcatt
cccggattcatggccactggatcgactgacaagacggtgaagctgtggaacatccaggcc
agcggcccttcactcgtcgtctctcgtaatctcgacgtgggcaaggtgtttgctacctcg
tttgcccccgatcccgaggtcgctttccgactagcagtggcgggcagctccggcagcatg
catgtttgggacaccagcaccaaccccggcgtccgaagtgctttcggacagcgcgtccct
gctctgaaggagggcgttagcgaggatcgactagtcggcgtcaatgatgacgagagcagt
tcgagcgaggatgagggagaagcagagaataatgagggaggcgactccatggatgaggat
taa
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integrated database retrieval system