Trichoderma atroviride: 25774947
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Entry
25774947 CDS
T10217
Symbol
TrAtP1_008151
Name
(RefSeq) uncharacterized protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
tatv Trichoderma atroviride
Pathway
tatv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
25774947 (TrAtP1_008151)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tatv03400
]
25774947 (TrAtP1_008151)
DNA repair and recombination proteins [BR:
tatv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
25774947 (TrAtP1_008151)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
AAA_27
Bap31_Bap29_C
Motif
Other DBs
NCBI-GeneID:
25774947
NCBI-ProteinID:
XP_013942032
UniProt:
G9NYX5
LinkDB
All DBs
Position
4:complement(join(2515365..2517986,2518041..2518172,2518242..2518265))
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AA seq
925 aa
AA seq
DB search
MASRPELKLDDEGGFIRFFKSLPDIGADAVRIFDRGDWYTAHGEDALFIAKTVYKTTSVV
RQLGKNDHTGLPSVTMTMTVFRQFLREALFKLGKRVEIWQSSSGRMNWKCIKQASPGNLQ
DVEDELGGQIDSAPMIMAVKISAKASEARAVGVCFADASVRELGVSEFLDNDLYSNFEAL
LIQLGIRECLIQYDKNEKEKERDPELAKLRQVINNCGVALAERPAGDFGIKDIEQDLARL
LKDEKSVAMLPQTDLKLAMGSAACLIKYIGALQDPSNFGQYQLYQHDLAQYMKLDAAALK
ALNLMPGLRDGSKTMSIYGVLNHCKTPVGSRLLAQWLKQPLMSKIEIEKRQQLVEAFFTD
TELRQTMQEEHLRSVPDLYRLSKKFQRGKANLEDVVRAYQVVIRLPGFIGTLEGIMDEAY
KDPLDEAYTNKLRELSDSLGKLQEMVEQTVDLDALDRHEYIIKPEYDHSLRVIRKKLDRL
DHDIRQEFQSAARDLGQEADKKIFLEANHKVHGVCMRLTRQEAGCIRGKSKYLECSTQKN
GVYFTTKQLQAYRREYDQLSQNYNRTQSSLVNEVVQVASSYCPVLERLAGVLAHLDVIVS
LSHAAVHAPDAYVRPKIHTRGEGQTKLLGARHPCMELQDDVQFITNDVELTRDQSSFIII
TGPNMGGKSTYIRQAGVIALMAQVGSFVPCSEAELTIFDSILARVGASDSQLKGVSTFMA
EMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFAMFATHFHEL
TALADQYPQVKNMHVTAHISGTNGDVNAKREVTLLYKVEPGICDQSFGIHVAELVRFPDK
VVRMAKRKADELEDFTTKHEDLGVSYSTEDVEQGSAMLKKVLVEWKEAVQGGELSKEEQV
AKLKELVAADEKLLANPFFQSVKAL
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagacccgaattgaagctcgatgacgagggcggcttcatccgcttcttcaag
tcgctgccagatatcggtgccgatgccgtgcggatattcgatcgaggcgactggtacacg
gcccacggcgaagatgccctgttcattgccaaaacggtctacaaaacgacgtctgttgtc
aggcagctcggcaagaatgaccacaccggtcttccctccgtcacaatgaccatgactgtc
ttccgccaattcctccgcgaggcactcttcaaactgggcaagcgggtcgaaatctggcag
agctccagcggtcggatgaactggaaatgcatcaagcaggcgtccccgggaaacctccaa
gacgtcgaagacgagctgggcggccagattgactcggcacccatgatcatggccgtcaag
atatccgcaaaggcttccgaggcgcgcgctgtcggcgtttgcttcgccgatgccagcgtg
cgagagctcggcgtcagcgagttcctcgacaacgatctatactccaatttcgaggctctc
cttattcagcttggcatccgagagtgcctcatccagtacgacaaaaacgaaaaagaaaaa
gagagggatcccgagttggcaaagctgaggcaagtcatcaacaactgcggtgtcgccctg
gccgagcgtcccgcgggtgactttggcatcaaggatatcgagcaagatttggctcgcctc
ctgaaagatgaaaaatcagttgccatgctgccgcagacagaccttaagttggccatgggc
tctgcagcatgtctgattaaatacattggagcccttcaggacccctccaactttggccag
tatcagctgtaccagcacgatttggcccaatacatgaagcttgatgctgcagccctcaaa
gcccttaatctcatgcctggtctgcgagacggttcaaagacaatgagcatctacggcgtg
ctcaaccactgcaagactcctgtaggcagtcgcctcttggcacagtggctcaagcagccg
ctgatgagcaaaatcgaaatcgagaagcgacagcagcttgtcgaggcattctttaccgat
actgagcttcgccagaccatgcaggaagaacatttacgctctgttcccgacctctaccgc
ttgtcgaagaaattccaacgcggcaaagctaatctcgaggatgtcgtccgtgcctaccag
gttgtcatccgccttcctggcttcatcgggaccctcgagggaatcatggatgaggcttac
aaagaccctcttgacgaagcatataccaacaagctccgagagctgtccgatagtctcggc
aagcttcaggagatggttgaacaaacggtcgatctcgacgctctagaccgacacgagtat
ataatcaagcccgagtacgatcatagcctgcgtgttatccgcaagaagctcgatcggctt
gaccatgatatcaggcaagaatttcagagtgccgcacgcgatttaggccaggaggccgac
aagaagattttcctcgaggccaaccacaaggtgcacggcgtgtgcatgcgtctgaccaga
caagaagctggctgcattcgtggcaagtcaaagtatctcgaatgctctacccagaagaac
ggtgtctactttacaacaaagcagctgcaagcctatcgtcgtgaatacgaccagctatct
caaaactataaccgcactcagagcagtctggtaaatgaggtcgtccaggtagcgtcctcg
tattgcccagtccttgagcgccttgctggcgtgcttgcccatctagatgtcatcgtatct
ctctctcacgcagccgttcatgcccctgatgcctacgtccgacccaagatacatacccgc
ggcgagggccaaacaaaacttttgggtgctcgccacccctgtatggaacttcaagacgat
gtgcaattcatcaccaatgatgttgagcttacccgcgatcaatcctcattcatcatcatc
actgggcctaatatgggcggtaaatctacctacatccgccaagctggtgtcattgccctc
atggcgcaagttgggtccttcgttccttgttcagaggccgaactcactattttcgactcc
atccttgcccgagtcggtgcttcagattcccagctcaagggtgtatcgacctttatggcc
gaaatgctcgagacagccaacattcttaaatcagcaactgccgagtccctcatcatcatc
gacgagcttggccgcggtacctcaacatacgatggcttcggtcttgcttgggccatctcc
gagcatatcgtcaaggaaattggctgcttcgccatgtttgcgactcactttcatgagctt
accgctctggctgatcagtaccctcaggtgaagaacatgcatgttacggcacacatcagc
ggcaccaacggcgatgtcaacgccaagcgtgaggtcacgctgctttacaaggttgagcct
ggtatctgcgatcagagtttcggcatccacgtcgccgagctggtgcggttcccggacaag
gttgtccgcatggcgaaacgcaaggcggatgagctggaagattttactaccaagcatgaa
gaccttggcgtgagctacagtaccgaggatgttgagcagggtagtgccatgctaaagaag
gtcctcgtcgaatggaaagaggccgtgcagggcggagagttgagcaaagaagagcaggtg
gcgaagctaaaggagttggtggcagctgacgagaagctcctggccaatcccttcttccaa
tcggtcaaagcgctatag
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