Trichoderma atroviride: 25775135
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Entry
25775135 CDS
T10217
Symbol
TrAtP1_004280
Name
(RefSeq) uncharacterized protein
KO
K12821
pre-mRNA-processing factor 40
Organism
tatv Trichoderma atroviride
Pathway
tatv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
25775135 (TrAtP1_004280)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tatv03041
]
25775135 (TrAtP1_004280)
Spliceosome [BR:
tatv03041
]
Complex A
U1 snRNP components
U1 related factors
25775135 (TrAtP1_004280)
Complex B
25775135 (TrAtP1_004280)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
WW_2
Motif
Other DBs
NCBI-GeneID:
25775135
NCBI-ProteinID:
XP_013939328
UniProt:
G9P855
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All DBs
Position
2:complement(join(4483707..4483994,4484058..4484813,4484880..4484996,4485065..4486282,4486387..4486530))
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AA seq
840 aa
AA seq
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MSGFAPPFPQPAAAWQEHKTPEGRAYYYNNVTKVTQWTKPEEMMSSAERALQSQPWKEYT
AEGGRKYWYNTETQQSSWEMPEAFKKALGSTGGPSNPVPQTPYSQGGGYPATGHDYSRDS
RDSRDSRDTREPYPESRQISYGNDSKAQPAFVPATNDPEYSSPEEAEAAFVKLLKRSGIQ
SDWNWEQTIRVIAKDPQFRAIRDPKERKEAFEKYCQDMILQDKERAKERLTKLRADFETM
LKRHPEITHYTRWKTARPMIEGETIFRSTDDEDERRQLFEEYIIGLKKAHKEQQASQKKS
AMDGLIELLPKLNLEAYTRWADARDIISSTPTLQENEKYQALSQFDILTAFQNHMKGLER
AFIENKQEEKSRKFRQERTARDAFKSLLNSLREDGKINAGTKWSQIVPLIENDERYLNMA
GQAGSTPQELFWDVVEEEERSLRGPKNDVLDVLEDKRFDLTPTSDLEEFLSIMKDDHRTA
NIDRDILKLIFDRLREKRASKREDERQPDRQQRRAIDDLRAYIKRLEPPVALSDTYDKVR
PRLLKSEEFQAVVSEEFRRSAFEKHLRRLREKDETDRAYRRHDRASIERDVSRRERDRSR
GDRSHRGGGRGGRRSRSPEPDAYEADRRKAIAERERNHRKSTMAENLLTTERSRLSPPPS
RRERDRERDRERDLDRPPRSRRDDDAFYDRERRDREDERERLYRRRADRGSYDELPYGDE
RPAAPRRRRQEEEDDYARRDSRDSKRLRRDRSRERTPLVMDVTATGPQNQSQPRMFEAAA
KKARLKSNRAGHYFHSIFSSSFSYSFTIWLVILFFFFFFAHIFPDFAHVLYTTPICNNIM
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctttgcgcctcccttcccgcagccggccgcggcctggcaagaacacaagacg
cccgagggtcgagcgtattactacaataacgttaccaaggtgacgcaatggaccaagcca
gaggagatgatgagctcggctgagcgcgctctccagtctcagccatggaaagagtacacc
gcagagggcgggcggaagtattggtataataccgagacgcagcagagctcttgggagatg
cctgaagcattcaagaaagctctgggttcgactggtgggccgagcaatcccgttccccag
actccgtattcgcaaggtggcggttatccagctacaggacatgactactctcgcgattcc
cgcgactcccgcgattcccgtgatactcgcgaaccgtaccccgaatctcgtcaaatatcc
tatggaaacgactccaaagcgcagccagccttcgtccccgccacgaatgacccagaatat
tcctctccagaagaagccgaggcagcattcgtcaagctgctgaaacgaagcggcatccag
tcagattggaattgggaacaaacgattcgcgtcattgccaaagatccgcagtttcgtgca
attagggacccaaaggagagaaaagaagctttcgagaagtactgccaggacatgatcctc
caagacaaagagcgtgccaaagagaggctgaccaagttgcgtgctgacttcgaaacgatg
ctgaagcggcaccctgaaatcacccactatactcgatggaaaaccgctagacccatgatc
gaaggcgagaccattttccggtccaccgacgatgaggacgagcgccgacagctctttgag
gagtatatcatcggactgaagaaggctcacaaggaacaacaggctagccagaagaagagt
gccatggatggcctgattgaattgcttcccaagctcaacctcgaggcatacactcgctgg
gcggatgctagggacatcatttcttccactccaactcttcaagaaaacgaaaagtatcaa
gcccttagtcaatttgacatcttgacagctttccaaaaccatatgaaaggtttggagcgg
gcctttattgagaacaagcaagaggagaagagccgcaaatttcgccaggagcgcacggcg
agagatgctttcaagtctctgctcaattctctccgcgaagatggcaagatcaacgccgga
accaagtggagccagattgtccctctcattgaaaatgacgaacgctacctcaacatggct
ggccaggccggatctactccccaagaattgttttgggatgtggtagaagaagaagagcga
tctctccgtggccccaagaatgatgtgcttgatgtccttgaagataagcggtttgatctc
accccaacaagtgatcttgaggagttcctatccatcatgaaagatgatcaccgtacagct
aacattgaccgcgacattctcaaattaattttcgatcgcttgcgcgagaagcgtgcctcg
aagcgcgaagatgaaagacagcccgaccggcaacagcgccgggctattgatgatcttcgt
gcgtacattaagcgtctagagccgccagttgcactgagcgatacatatgacaaggtacga
cctagactactgaaatcagaagagttccaagccgtcgtctccgaagagtttcggcgaagt
gcctttgagaaacatctccgtaggttacgcgagaaagatgagaccgatcgtgcctatcga
cgccacgaccgagcttccatcgaaagagacgtctcaagacgggaaagggatcgatctcgc
ggcgaccgttcacatcgcggcggcgggcgtggtggccggcgtagccgcagcccagaaccc
gatgcatatgaggcagataggagaaaggcgattgccgagcgcgagcgaaaccatcgcaag
tctactatggcagagaaccttttgaccaccgagcgtagtcgcctatcgcctccgccatca
cgccgcgagcgcgatcgtgaacgtgaccgagaacgtgacctggaccgtccccctcgctct
aggcgcgacgacgacgcgttctatgaccgcgagcgcagagacagggaagacgagagagaa
cggctctaccgccgtcgtgctgatcgaggttcgtatgacgaactcccctatggagatgaa
cgcccagcagcccctcggcgtcgtcgtcaggaagaggaagacgactacgcccgtcgggat
tccagagattcaaagagactcagaagagatcgttcacgtgagcgcacccccctcgtgatg
gacgtcaccgcaacaggaccccagaaccagagccagccaaggatgttcgaagcggcagcg
aagaaggcgagattgaagagtaatcgagccggtcactactttcacagcatattttcgtct
tctttttcctattctttcactatctggctagtaatccttttttttttttttttttttgca
cacatattcccggactttgcccatgtactctacacaactcccatatgtaacaacatcatg
tag
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