Trichoderma atroviride: 25775264
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Entry
25775264 CDS
T10217
Symbol
TrAtP1_005888
Name
(RefSeq) uncharacterized protein
KO
K11756
chromatin structure-remodeling complex subunit RSC1/2
Organism
tatv Trichoderma atroviride
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tatv03021
]
25775264 (TrAtP1_005888)
03036 Chromosome and associated proteins [BR:
tatv03036
]
25775264 (TrAtP1_005888)
Transcription machinery [BR:
tatv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
25775264 (TrAtP1_005888)
Chromosome and associated proteins [BR:
tatv03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
25775264 (TrAtP1_005888)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
DUF7877
CDC45
Motif
Other DBs
NCBI-GeneID:
25775264
NCBI-ProteinID:
XP_065968987
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All DBs
Position
3:complement(join(2062282..2063190,2063256..2063815,2063894..2064776,2064832..2064934,2064989..2065155))
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AA seq
873 aa
AA seq
DB search
MDQEHANEAVDGDVDMKESPNESSVDMEDNSAQDEPHDSFQLIYDLSKYLCSVEEGGEEL
AAGFQRIPNRRLLPDYFDIIAEPIAFSTIRSKIQKKQYSTFPEFVRDVSQICHNAQVYNR
PSAPIFGAAERLREVFKAELQKLVDSGDITEDEARLPDLGELPPVESSPSLESEAEDEED
GRPKRAERRIGNQDDDEEEEEEEEDTDEDSDDEDYGGGRRRRSGRGDRSTDKDSSFQQKS
RRPPMVLTPTEARIFSILKELRKAKDKDGNSLVAPFERLPDKTVVPDYYQIITNPIALDS
IKTKAKRKKYQTVDQALSDLELMFENAKLYNEDDSEVFEAAVNLQQQARVLAEQEKLKPD
DDFRDEDGRLPLASIDYGGEVWKVGDWVHIRNPNDLAKPIVAQIFRTWQDRDGQKWINAC
WYYRPEQTVHRYEKHFYEREVVKTGQYRDHPIADVIDRCYVMFVTRFNKGRPRGLSPDKD
VYVCESRYNEEKFHFNKIKTWASCVPDEVRDKDYEMDLFDIPHQMKKIPSPIKHLLRDDA
KETDELPRPTWGSPNAPPIIGAVHRRPPGPNESPPPDMMLPAMPVMSKIPPEPAQRLPLN
PTAKDATSEAARNGAVPYSMVGAVPAPNQYYGHMPQHFQPVNPTAGSNIPQTPVPIPHPP
QQTPPAHMQMRSVQYQYQPQPAYMQNYNPGFAQSPVMPMHHQQMPNPRPTGYMQGHAATV
PRPPGMGTPGAVQAHANMYNPPRPPEVYTLPDNINETLPDTIRREFQHDDAGRVLFFSAA
PLDRSCGGLSPESAGLGHSTKYLAGRETWLAEREKKRKDRDEALHGLREKVLCIEQGPDE
SPVVSQATRAIEIFFEQLNQETGQLKGDFGLEV
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggagcacgctaacgaggccgtcgacggcgatgtcgacatgaaagagagcccc
aatgaatctagcgtagatatggaagacaactcggctcaagatgaacctcacgattcattt
cagctgatctatgatctttcgaaatatctatgtagcgtcgaagaaggtggtgaagagctc
gcagctgggtttcagcgcatccccaacagacgcctcctgcccgactacttcgatatcatc
gccgaacctattgctttcagtactatacggagtaaaatacaaaaaaagcaatattctacc
ttccccgagtttgtcagagatgtctcccaaatttgtcacaatgctcaggtttacaatcgc
ccctcagcgcctatctttggggctgctgaacgactacgagaagtcttcaaagcagaactt
caaaaactcgttgacagtggagatatcacagaggacgaggcgcgtttgccagatttggga
gagctgcctcctgtcgaatcatcaccatcgctagagtctgaggctgaggacgaagaagac
ggacggccaaaaagagctgagagacgcattggcaatcaagatgacgatgaggaagaggag
gaggaggaggaggataccgacgaagactccgacgatgaagactacgggggaggacgccga
agacgatctggtcgaggcgaccgcagcaccgataaagactcgagtttccaacaaaaaagc
cgccggcctccgatggttttgaccccgacggaagccagaatcttttcgatcctcaaagaa
cttaggaaagccaaggataaagatgggaactctcttgtcgcaccattcgagaggctgcca
gataagacggtagtccccgactactaccaaataatcacaaaccccatcgcattggacagc
atcaaaacgaaggcgaagcgaaaaaaatatcagacggttgaccaggcgctatcagacctg
gagttgatgtttgaaaatgcgaagctatataacgaagatgatagcgaagtgtttgaagct
gccgtgaatctacagcagcaagcccgggtactagcagagcaggaaaagttgaaaccagat
gatgacttccgagacgaggacggcaggcttcctctagcaagcattgactatggcggagaa
gtctggaaagttggcgactgggtgcacattcgcaaccccaatgacttggcaaagcccatt
gttgctcaaatattccgcacatggcaggaccgtgacggccaaaagtggattaatgcctgt
tggtactacagaccggagcaaacggtacatcgatacgaaaaacacttttacgagcgcgaa
gtggtgaagacaggccaataccgcgaccatccgattgcagatgtcattgaccgctgctat
gttatgtttgtcacgcgatttaataaaggccgtccccgagggctctccccagacaaagat
gtctacgtctgcgagtctcgatataacgaagaaaagttccacttcaacaagatcaaaaca
tgggcgagctgtgttccagatgaagtacgagataaagactatgagatggatttgtttgat
attccccaccagatgaagaagatacccagcccaatcaagcatctcctccgcgacgatgcc
aaggaaacagatgaactcccgcggcctacatggggaagcccgaatgctccacccataatt
ggcgccgtccatcgtcgaccaccagggccgaatgaatcaccacctccagatatgatgctg
cctgcaatgcctgtcatgtccaagattcctccagaaccagctcaacgcctcccactaaat
cctacagctaaggacgctacgagtgaggccgcgagaaacggagctgttccttactccatg
gttggcgcagtaccagctccaaatcagtattatgggcatatgccacaacatttccagcca
gtcaatccgactgctgggtcaaatataccgcagacgcctgtacctattcctcatccaccg
caacagactcctcctgcgcatatgcagatgcgatcagtgcagtatcaatatcagcctcag
cctgcatacatgcaaaattataatccaggcttcgctcaatcaccagtaatgcctatgcac
catcaacaaatgccaaatcctcgacctacggggtatatgcaaggccatgctgccacagta
cccagaccacccggaatgggtacacctggcgctgttcaggcacatgctaacatgtacaat
ccgccacgaccccctgaggtttatacgttaccggacaacatcaatgaaaccttgcccgat
actatacggcgcgagttccaacacgatgatgccgggagagtcctgttcttttcggctgct
cctcttgatcgctcatgtggcggcctgtcaccagaaagcgcgggacttggacatagcacc
aaatacctggctgggcgggagacatggttagctgagcgcgaaaagaagcgaaaagatcgg
gacgaggcgctgcatggcctgcgagaaaaagtactttgcatcgaacaagggcctgacgaa
tctccggtcgtctcacaagctactcgcgcaatcgagatattctttgaacaactcaatcag
gagactggacagttgaaaggtgactttggattagaagtttag
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