KEGG   Trichoderma atroviride: 25775377
Entry
25775377          CDS       T10217                                 
Symbol
TrAtP1_012317
Name
(RefSeq) uncharacterized protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
tatv  Trichoderma atroviride
Pathway
tatv03030  DNA replication
tatv03410  Base excision repair
tatv03420  Nucleotide excision repair
tatv03430  Mismatch repair
Brite
Enzymes [BR:tatv01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     25775377 (TrAtP1_012317)
    6.5.1.6  DNA ligase (ATP or NAD+)
     25775377 (TrAtP1_012317)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     25775377 (TrAtP1_012317)
DNA replication proteins [BR:tatv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    25775377 (TrAtP1_012317)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     25775377 (TrAtP1_012317)
DNA repair and recombination proteins [BR:tatv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     25775377 (TrAtP1_012317)
   NER (nucleotide excision repair)
    Other NER factors
     25775377 (TrAtP1_012317)
   MMR (mismatch excision repair)
    Other MMR factors
     25775377 (TrAtP1_012317)
SSDB
Other DBs
NCBI-GeneID: 25775377
NCBI-ProteinID: XP_065971577
LinkDB
Position
7:join(956179..956426,956549..956688,956752..957871,957925..958693,958751..959287)
AA seq 937 aa
MRPIINASLPAQRVMLAAGLYRSSCRCLGTRTTNSPARPRYKYCAVDALALRFASTQLIR
CWPSASASAGASSNMAPKQATLGKFFGVKAAAPARQTTLAFATKAGTKEADKAEDEGDAS
TKENSDPEKDSKKRPRSPKKRTEAKPKLAEEEDEAPVSKRARRTRVKIEDDEDEAPQSSP
KKEEAPSSPPAKRKRSRSPKSSPKSRSQSPKAAKIKEESEDVAEKAAKEEEQSSESASEA
DSDAEPKPAVTAKARKAQQTMLQTKEKDAYPDWQPGTPVPYAALCKTFSLIELTTKRLII
MEYCSKFLRQVMRLTPDDLLPTVLLMINKLAPDYAGIELGIGESLIMKAIGETTGRSLQV
IKADQKEIGDLGLVAVKSRSTQPTMFKPKALTVRGVHQGLMSIATVTGNGAQGRKVDGIK
KLLSSSDSHLKEKVDINKDKGGPSEAKYIIRFLEGKLRLGLADRTVLVSLAQAVVAHEAE
VKGKIPTTSDLENGESILKTVYSELPSYDVIIPAMMEHGIANLRDHCKLRPGVPLKPMLA
KPTKAITEVLDRFEGQKFTCEYKYDGERAQIHYVAKDAAQDLDASTQGSTKKIESGVACI
FSRNSEDLSKKYPDVLEKLSAWIKEDTKSFVVDCETVAWDVAEKKVLPFQQLMTRKRKDV
KAEDIKVKVCVFAFDLLYLNGEAVVEKSLRERRELLSTAFVPTEGEFQLATHMNGQELDE
IQTFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVLGAY
YGKGKRTSVYGAFLLACYNPSTDVYETVCNIGTGFSEQVLEDLHAQLSEITIARPKPFYS
HSAGGQHQPDVWFEPRYVWEVKTADLTLSPRYKAGWKEGVDPAGEKGISLRFPRFIKIRD
DKKPNEATSSRQVAEMYRKQESVTKNKGPSVDDDFEY
NT seq 2814 nt   +upstreamnt  +downstreamnt
atgcgcccgatcattaacgcgtctctgcctgctcaacgcgtcatgctagcagctgggctg
tacagaagcagctgtcggtgcctaggcaccagaaccactaattcaccagctcggcctcgc
tataaatattgcgctgttgacgccttggctctgagatttgcatcaactcaattgattcgt
tgctggccatctgcatctgcatctgccggtgcatcctccaacatggctccgaaacaggca
actctgggcaaattctttggggtcaaggcagctgcaccagcaagacaaacgacgctggcg
tttgcgaccaaggcggggaccaaggaagcagacaaggctgaagacgagggcgatgcaagc
acaaaggaaaactcggatccagagaaggattccaaaaaacgcccgcggtcacccaaaaag
aggacggaagcaaagcccaagctagctgaagaggaagacgaggctccagtttcaaaaaga
gcaaggcgaacaagagtcaagattgaggatgacgaggatgaagctcctcagtcgtcccca
aagaaagaagaagctcccagcagtccccctgctaagagaaagaggtcacggagtcccaag
tctagcccaaagtcgaggtcgcagtcgccaaaggcagccaagataaaagaggagagcgag
gatgttgccgagaaagctgcaaaggaggaggagcaatcttcagaatcagcgtcagaggct
gatagcgatgcggaaccaaaaccagctgttacggccaaagcacgcaaagctcagcaaaca
atgctccaaacgaaagaaaaagatgcatatcctgattggcagcctggcacccctgtacca
tatgcagctctttgcaagaccttttcgctcattgagctgacgacgaaacgtttaatcatc
atggagtattgttcaaagtttctgcgccaagtcatgcggctcacccctgatgatctcttg
cctaccgtcctgctcatgatcaacaagctggctcctgactacgccggcattgagctcggt
atcggtgaatccctaatcatgaaagctatcggcgaaactaccggaagaagcctccaggtc
atcaaggctgaccagaaagagattggtgacctcggtctcgtggctgtgaagagcagatcg
acccagccaaccatgttcaagccgaaagcgctgacagtaagaggcgttcatcaaggcttg
atgagtattgcgacggtcactggtaacggcgcccaaggtcgcaaagttgacggcatcaag
aagcttctatcttcttcagattctcatttgaaggagaaggtggatatcaacaaggacaag
ggcggcccaagcgaagcaaaatatattatccgattcttggaaggcaagcttcgacttggc
ttggcagaccggactgttttggtttcgttggctcaagcagttgtagcacatgaagccgag
gtgaagggaaaaatccccaccacttcagatttggaaaacggcgagtctattctcaagaca
gtttacagcgaattaccgagctacgatgtcattattccagccatgatggagcacggcatc
gccaatctgagagatcactgcaaactccggcctggcgtgcccctgaagcccatgttggcc
aaaccaacaaaagctattacagaagtcttggaccggttcgagggccaaaaattcacgtgc
gaatacaaatacgacggtgaacgtgctcagattcattatgtggccaaagatgccgctcag
gatttggacgcatctacccaaggatcgaccaaaaaaattgagtcaggtgttgcctgcatt
ttctctcgaaactcggaagatttgtccaaaaagtatcccgacgttcttgagaagctcagc
gcatggatcaaggaagacacaaagagcttcgttgtcgactgcgagactgtggcatgggat
gtggccgagaagaaagtattgcctttccagcaactcatgactcgcaagaggaaggatgta
aaggccgaagacatcaaggtcaaggtttgtgtttttgcctttgacctgctatatctgaac
ggagaagcagtggtggagaagtcgcttcgtgagcgtcgcgaactcctcagcacagcattt
gttccaacggaaggcgagtttcaattggcaactcacatgaacggccaagagctggatgag
attcagacattcttggatgagagtgttaaggcatcgtgcgagggtctgatggtgaagatg
ctggatgggacagaaagcgggtacgagcccagcaagcgaagtcgaaattggctcaaggtt
aaaaaggactatctctctggcgtgggtgactctcttgacctggtcgtcctgggagcttac
tatggcaagggcaaaaggacatcagtctatggtgctttcttgcttgcttgctacaaccct
tctaccgatgtgtatgagacggtctgcaacattggcactggcttctcggagcaagtcctc
gaagacctccatgcccagctctccgaaatcacaattgcccgccccaagcctttctactca
cactctgcaggcgggcagcatcaacctgatgtgtggttcgaaccacgctacgtgtgggag
gtcaagacggcggatttgacgctcagccctcggtacaaggctggatggaaagaaggcgtg
gatccagcaggcgagaagggcatcagtctgcgatttccccgattcatcaagattcgagac
gataaaaaacctaatgaagcaacgagtagcaggcaagttgcggagatgtacaggaaacag
gagagcgtgacgaagaataagggtccgtcagtggatgatgactttgaatattaa

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