Trichoderma atroviride: 25775435
Help
Entry
25775435 CDS
T10217
Symbol
TrAtP1_004849
Name
(RefSeq) uncharacterized protein
KO
K26109
nuclear exosome regulator NRDE2
Organism
tatv Trichoderma atroviride
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatv03019
]
25775435 (TrAtP1_004849)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
25775435 (TrAtP1_004849)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Suf
TPR_17
EME1-MUS81_C
Motif
Other DBs
NCBI-GeneID:
25775435
NCBI-ProteinID:
XP_013939727
UniProt:
G9P5U1
LinkDB
All DBs
Position
2:join(6036610..6038370,6038431..6038876,6038943..6039492)
Genome browser
AA seq
918 aa
AA seq
DB search
MPGEGFSTFAGRDGLRSKLPKVTSRPIRASSRNANVDAIDEADGYIPISSSRKRKRDQAG
DQSSGDEQPSYRSIEGKAKPRQYSDSDSDEDSDMSTDMLATVQNNPLKQESIRLSKRVKD
SPDDIDAWLELVDHQDALLRAGEDFDHTVLENEAHSFAEIKVSMLESALENAKNAEDRRR
ILVPLMREGVKVWTSKAAAKKWSEVLEHGDGDFLLWKTHVDFLTSNIATFQYEDVKKVLL
DRLRFALSRLASDQPEEAIVEAIFVFLRVTRFVHDAGYKELAVAAWQGLLELNLFRPLSI
EDEQSALESFNDFWESEVPRIGDIGAKGFQHYVETEGTGEAAEPVKASSIGSPSSRDVYK
AWAYLEQSHSQEANMPARTMDDGTDDDPFRVVMYSDIRPFLFLIPASLLPAVSSQLIDAF
LLFTGYPPVFRASNWTEVAYDDQFISSSLIKIDLEPVKHNDDPDNWQRVEPRFDTGVKAA
ASPSLLFSGLRWYRYIATKSHNSVMNPAWVSEALKQLVHSGGMEELAQYYLAVAFSNEPT
NIKRPAKALLKQYPTNSELYNAYALCEFANDPNVAGKVLRAAIESPSLSEKWYKFMFYRT
WAWMEFENGNVDLAKVRLCSSVDDTLKVIGTDVPEVGSTILLKAHQTFTSDFHQYLTDGD
SAGASTLAECMILLSYFTASGNEEPTSASQGNIAAAMNTVDVISREFQSQDQVGAKAHEQ
IFQFATHILYLHASKGPFRRVYLRERLSAFIHQFPQNTIFISMFEWADASLRVIDETRDL
LYDQVLVKKHDCISSRMFIIQHELTHGNTNTAKAAFEQALTSDVCQNSFVLWISYIRFCQ
AQKQLRAKAKDVFYRALRHCPGSKEVIMEAFLTLIRDMESDELKAVYNTMTSKGTRVHVD
MEEFLDKRRLELSKEKRR
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgaaggattttctacttttgcaggccgagacgggcttcgatcaaagttgcca
aaggtgacatccaggccaatcagggcgtcttcccggaatgcaaatgttgatgccatagac
gaagccgacggatacataccaataagctcatctagaaaacggaagcgagatcaagcgggt
gaccaatcctcgggtgatgaacagccctcatatcggtctattgaaggcaaagcaaagccg
cgacaatactcagacagtgactctgatgaagattccgacatgtccaccgacatgctcgcc
acagtccaaaacaatccacttaaacaggaatccatccggctaagcaaacgagtaaaggat
tctccagacgacatcgatgcttggcttgagcttgtagatcatcaagacgccttgctgagg
gctggtgaagattttgatcatacggtattagaaaacgaagcccatagcttcgcagagatc
aaagtatccatgcttgaatcggctctcgaaaacgccaaaaatgcggaagatcgcagacgc
attcttgttcctttgatgcgagagggcgtcaaggtgtggactagcaaagcagctgctaag
aaatggtcagaagtattagaacatggagatggcgattttcttctgtggaaaacacatgtc
gactttttgacttcgaatattgcaacatttcaatacgaagatgtcaaaaaagtgcttcta
gaccgtttacgcttcgctttgtctcgtcttgcatcagatcagccagaagaagccatagta
gaagccatatttgtctttttgagggttactcgcttcgttcacgatgccggctacaaagag
cttgctgtagcagcttggcagggtctcttggaactcaacctctttaggccactttccatc
gaggacgaacaatctgccctggaatcttttaatgatttttgggaaagcgaagttcctcgc
ataggagacatcggcgctaaggggtttcaacattacgtcgaaaccgagggcaccggagag
gcggcagagccggtaaaggcaagctcaattggctcgccttcgtcgcgagacgtctataaa
gcttgggcttacctagagcaatctcattcgcaagaggctaatatgccggcgagaacaatg
gacgatgggaccgacgatgatccgtttagagttgtgatgtactctgatatcaggcccttt
ctctttttgataccagcatcccttctacccgcggtttcaagccagctgattgatgcgttt
ttgctctttactggctacccgccggtgtttagagcgagcaattggactgaggtagcttat
gatgaccagtttatatcatcctccctcatcaaaattgacttggagccggtcaagcataac
gatgatccagacaattggcagagagtcgaaccacggtttgatacgggcgtaaaggcggcc
gcctctccttctttactatttagtggcttgaggtggtatcgatatattgccacaaagtcg
cacaactctgttatgaatccagcttgggtatcagaggcactgaagcagctcgtccacagc
ggcggaatggaagagctggctcagtattacctagcggtagccttttccaatgagcctacc
aacatcaaaaggcctgctaaagcacttctcaaacaatatcctactaattccgagctatat
aatgcctatgccctttgcgagttcgccaatgatcccaacgtggcgggcaaagtgctgaga
gccgcaattgaatcaccttcgctatccgaaaaatggtataagttcatgttttataggact
tgggcatggatggaatttgaaaacggaaacgtcgacttggcaaaggtgcggctctgttca
tcggtggacgacaccctgaaagtgatagggacggatgttcctgaagttggcagtactata
cttctcaaagcccatcaaacatttacctcggattttcaccaatatcttaccgatggagat
tcagcaggagcaagcacacttgcggaatgcatgattttgctgtcgtacttcacagcttca
gggaatgaagaaccaacatcagcatcgcaaggcaatattgcagcagcaatgaacacagtt
gacgtgatttctcgagaattccagtctcaagatcaagtcggtgccaaagcccacgaacag
atttttcaatttgctacacatattttatacctacatgcatcaaaagggccctttaggaga
gtatacctacgggagaggctctcagctttcattcaccagtttccgcagaacacaattttt
atatccatgtttgagtgggcagatgcgagcctccgtgtcattgatgagacgcgtgatctc
ttatacgaccaggttttagtgaaaaagcatgactgcattagcagccgcatgtttatcatt
caacacgagcttacacacggcaacaccaacacggccaaggctgcatttgaacaggctctg
acgagcgatgtttgccagaatagtttcgtgttgtggatatcttacattcgcttctgtcag
gctcagaagcagctacgtgccaaggcaaaggatgtgttttacagggctctgaggcactgc
cctgggtcgaaggaagtgatcatggaagctttcctgacactgattcgcgatatggaatca
gatgaactcaaggcggtgtacaatacgatgacgtcgaagggaacgagggttcacgtcgac
atggaagaatttctcgataagcgcaggcttgaattgtcgaaagagaagagaagataa
DBGET
integrated database retrieval system
