Trichoderma atroviride: 25775528
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Entry
25775528 CDS
T10217
Symbol
TrAtP1_008375
Name
(RefSeq) uncharacterized protein
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
tatv Trichoderma atroviride
Pathway
tatv03030
DNA replication
tatv03410
Base excision repair
tatv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
25775528 (TrAtP1_008375)
03410 Base excision repair
25775528 (TrAtP1_008375)
03420 Nucleotide excision repair
25775528 (TrAtP1_008375)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tatv03032
]
25775528 (TrAtP1_008375)
03400 DNA repair and recombination proteins [BR:
tatv03400
]
25775528 (TrAtP1_008375)
Enzymes [BR:
tatv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
25775528 (TrAtP1_008375)
DNA replication proteins [BR:
tatv03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
25775528 (TrAtP1_008375)
DNA repair and recombination proteins [BR:
tatv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
25775528 (TrAtP1_008375)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
zf_DPOE_2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
25775528
NCBI-ProteinID:
XP_013942184
UniProt:
G9NZM6
LinkDB
All DBs
Position
4:complement(join(3116178..3122077,3122139..3122284,3122366..3122973))
Genome browser
AA seq
2217 aa
AA seq
DB search
MPNTSLRRPAKGYKRGGKTAYHGPKTRTFAASSRAEGTSADEKWERTRLAQSIDDKMGFA
RYESGKRKEGWLVNVQPTSIEDERIPGGRAALDCYFIELDGSTFKATVEYDPYFIIAVKK
GRESEVEEWVKRVPGGGVVKSVRRMEKEDLSMPNHLMGYRRTFIELKFANVGDLMSAKRD
IMPIAEKNRKNMNAMDAYAEVATMSGDFDLFDNDLRDDERNTSNSISEASDFIVDIREYD
VPYHVRVMIDLDIRAGKWYFVEAKHGVTKIIPNEDRSLPADPVVMAYDIETSKLPLKFPD
AATDQIMMISYMIDGQGFLITNREIISEDIGDFDYTPKPEYPGPFMIFNEPDEKAVIERF
FLHIKEARPTVIATYNGDFFDWPFVETRASINGIDMYHEIGWKRDSEDQFKCNYSVHMDC
FHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYAQERPQTLAEYSVSDAVATY
YLYMKYVHPFIFSLCTILPLGGDDVLRKGTGTLCEMLLMVQAYQKEIVLPNKHVTPKEAF
WDGHLLDSETYVGGHVESIEAGVFRSDIPVNFAVDPGAVDELLRDLDNALNFVITVEEHK
SLDDVTNYDEVKQQIKSKLEALKETPNRNERPLIYHLDVASMYPNIMTTNRLQPDSMISE
SDCAACDFNRPGKTCDRRLPWAWRGEYIPAKRDEYNMIRHALENEKFPGKTPYAPPRAFQ
DLSTDEQATLVRKRLQLYSQKVYHKIHDSTTIVREAIICQRENPFYINTVRDFRDRRYDY
KGKAKVWKGKTDALKSSGAPGNEIDDAKKMIILYDSLQLAHKVILNSFYGYVMRKGSRWY
SMEMAGVTCLTGATIIQLARQLVERLGRPLELDTDGIWCMLPATFPENFSFKLKNGKKLN
ISYPCVMLNHLVHDKFTNHQYQTLVDDKTHKYETHSDNSIFFEVDGPYRAMILPTSKEED
KNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEGEDLSQCYTAVAKV
ANQWLDVLDNKGSTLADQELMELISENRSMSKTLEEYGSQKSTSITTARRLADFLGEQMV
KDKGLNCKFIICSRPRNAPVTERAVPVAIFSADEAVKRTYLKKWLKEEPADTDPRALLDW
DYYSERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINIKDDKMKQKKLTDLFSSK
EPLADITNINRAEDMEDFGAKLLKPKQLGELIASSQPPAVSQKRKSPEPAENPNPMAALP
DNMPDPSDDYVGFLEYQKKKWKLQKQARLRRRQLFGERRSNANSNIQQTFMKQAHFTFMN
TWQLLHLKATDTPGVVTAHVLIDAKIHTLKINVPRQVFLNLKKEELPDVEIAGCEVEQVN
YTLPNGHQSKHLFKLTVPEDVYFNEAEKFSLLFNHPSVEGVYEKQVPLNIRAVLRLGNLC
TIDEQQEAVLGKGLEQGFDLMGLKRPTKPKTYLESSPLAYIYISHITAGDRQIFGLFSTT
SDQAYVVILQKGRDSGSDLPNITRMYSELLARRAEEAAGTNWQDCFGYQEKVTFKITQVT
TRRKAHLEIADVVRKLRKDESRPQMMVIQSSQHNLLVHDVPILGEFPVLPLKYDATDSSL
PPLGWQAVVARRLVGHYLGLGSWILHLTALARYGDVPLCNLERDDPRFLIDIAYARRLQA
NGVVLWWSPDPRPDHAGYEKDDITGSLDTVKMPSINNPGTFSSVCIDLDIRNLTINTILT
SSLINELEGAESISFNPTADGSEILASENGFANAGVLVLREMVKAWWAEACKGSTMADVL
VQHLVRWVENPDSFMYDRALHYYVQMMSRKAFQQLMSDFRRVGSQVIFASANRLILQTTK
AEVGNAYAYSQYIIKSIKSKSLFHFIDLEIKEYWDYLVWYDEFNYGGRATQVVAESEEQD
LETIMHWQMATFLPVRLQPIFQDWVIEFIQLMHKLKRPETNDPNSTPRLTQLPNRKQDPD
GETQIILGKAFEKPMKKVIAGLINQQKRELMHPELAEDYSFPSLPGSHLPLRNPILELVK
SIMQVLSLDKNITLEARLLRKELLALFEIREFSKDGTFANPSESLKLLQVSCDSCTMTRD
LDLCRDEDLFSSSGENGGQSWQCGFCNTEYDRVSIEERLLAMVEGWTTEWACQDLKCERC
GALRVNDFMEHCTCSGGWKEVLSRDEIVRKLAVMRRVAKYYGLRMLGNVVDGLSEAL
NT seq
6654 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacacatctctgcgccgcccagcaaagggctacaaaagagggggcaaaactgca
taccatggcccaaaaacccgaacttttgctgcgtcttcgagggccgagggtacctctgca
gacgaaaagtgggagcgtactcgtttggcccagagcattgacgacaagatgggatttgcc
cgttatgaaagtgggaagagaaaagaagggtggctagtcaacgttcagcccacttctatc
gaggacgagaggataccaggtggccgagcagcgttggactgctacttcatagaacttgac
gggagcacattcaaagctaccgtcgagtatgatccttacttcataatcgcggtcaaaaaa
ggccgggagtctgaagttgaggaatgggtgaagagagtgcctggtggtggagttgtcaag
tccgtcaggagaatggaaaaggaagatctcagcatgccgaatcacttgatgggctaccga
cggacattcatcgaactcaaatttgccaacgtcggcgacctgatgtccgcaaaaagagat
atcatgccgattgcagagaagaatagaaaaaatatgaatgccatggatgcatatgccgag
gttgcgacgatgagcggcgacttcgatctttttgataatgatttacgagatgacgagcga
aacaccagtaattctatttctgaggcgagcgatttcatcgttgacattcgcgaatacgat
gttccataccatgttagagtaatgatagacttagatattagagctggaaagtggtatttt
gtcgaagcaaagcatggcgtcacaaagattataccaaacgaggacagatccctgccagcc
gatccagttgtcatggcatacgatatcgagacatcgaaacttcccctgaaattccccgac
gccgctaccgatcagattatgatgatatcatacatgattgatggccaaggattcctgatc
acgaatagagaaatcatttccgaggacattggcgattttgattacacgccaaagcccgag
taccctggcccctttatgatttttaatgagccggatgaaaaagccgttatcgaaagattc
tttcttcatatcaaagaggcgcgccctaccgtaattgcgacttacaacggtgacttcttc
gattggccctttgtcgagacgagagcgagcataaatggcatcgacatgtaccacgagatt
ggctggaaaagagacagcgaagaccagttcaagtgtaactatagtgttcatatggactgc
ttccattgggtcaaccgagattcttacttgccccaaggatctcgaggtttaaaagccgtt
acagtcgccaagcttggatatgaccccgatgaactcgacccagaactgatgacgccatat
gcgcaggagcgaccgcagacgttggcagagtactcagtttccgatgctgttgccacctat
tatctgtacatgaagtacgtacatcctttcatcttctccctctgcacaattttgccattg
ggaggcgacgacgtcctgaggaaaggtaccggtacactctgtgagatgcttttgatggtg
caagcataccaaaaagagattgtactaccgaataagcacgtaactccgaaggaagctttc
tgggatggtcaccttctcgactctgagacgtatgtcggtggccacgtcgagagtatcgaa
gctggtgtcttccgatccgatatccccgtcaattttgccgttgaccccggcgcagttgat
gagctcctgcgagatttggacaatgcgctgaatttcgtcataaccgttgaggagcacaag
tctctggacgatgtcaccaactacgatgaagtcaagcagcagattaagagcaagcttgag
gcattgaaagagacgcccaaccgaaacgaaaggccgctcatttatcacttggacgtcgca
tctatgtatccaaacattatgacaacaaatcggttacaaccagactccatgatttccgaa
tcagattgcgcggcttgtgatttcaatcggccaggcaaaacatgcgatcgacgattacct
tgggcctggagaggggagtacattcctgccaaaagagacgagtataatatgattcggcat
gcccttgagaatgaaaagtttcctgggaaaacaccttatgctccaccgagggcatttcaa
gacttgtcgacagatgagcaagcaactttggtgaggaagcgtcttcaactctactctcag
aaggtataccacaagattcacgactctactaccattgttcgcgaagcaattatttgccag
cgtgagaatcctttctacatcaataccgtccgtgattttcgtgatcgtcgttacgattac
aaaggcaaagccaaagtgtggaagggaaaaacggatgcgctaaagtcatctggagcaccc
ggcaatgagattgacgatgcgaagaaaatgatcattctgtacgattctctacagcttgcg
cacaaagttattctgaactctttctacggatacgtcatgaggaaaggttctcgatggtac
tctatggaaatggcgggtgttacatgcttaacaggagccacgattattcagcttgctcgt
cagcttgttgaacgccttggaaggcccctcgagctggatactgatggtatctggtgcatg
cttccagctacttttccagaaaatttctcgttcaagctgaagaacggcaaaaagctgaac
atatcatatccctgcgtcatgcttaaccatcttgtgcatgacaaattcaccaaccaccaa
tatcagactttggtggatgacaaaactcataaatacgagactcatagcgacaattccatc
tttttcgaagttgatggtccctatagggccatgattctgcccacttcaaaagaggaggat
aagaatttgaagaagcgatacgccgtgttcaatgacgacggcagcctggcagaattgaaa
ggatttgaagtcaaacgtcgtggtgagctaaagctcattaagattttccaacaacagatt
ttcaaattttttttggaaggagaggatttgtcgcaatgttacaccgctgttgccaaggtt
gcaaaccaatggctagatgtgttggataacaaaggctctactcttgccgaccaagagctg
atggagctgatttctgagaaccgaagcatgtccaagactttggaagaatacggaagtcag
aagtcgaccagtatcacgaccgcacgacgtcttgccgactttctaggtgagcagatggta
aaagacaaaggtctgaattgtaaattcattatctgttctcggccacgaaatgctcctgtt
acagaacgagccgttcctgtagccatcttctccgcggatgaagctgtgaagcgaacatat
ctaaagaagtggctcaaggaggagcctgcagataccgatcctcgagcccttctagattgg
gattattactcggagcgtcttggatctgtgatccaaaagctcatcaccattcctgccgct
ttgcagaaagtccgcaatcccgtacccagagtccctcatcctgattggcttcaacgaaga
ataaatatcaaggatgacaagatgaagcaaaagaaacttacagacctattcagcagcaaa
gaaccgttagcagatatcacaaacattaatcgagcagaagacatggaggactttggtgcc
aagttgcttaaaccaaagcaactcggtgaacttattgcgtcgtcacaaccaccggccgtt
tctcagaaacgaaagtctcccgagccagcagagaatcccaatccaatggccgctttgcca
gacaatatgcctgatccatcagacgattacgttggattcttggagtatcagaagaagaaa
tggaaactgcagaaacaagcacgtcttcggaggaggcagctgtttggcgagagacgaagc
aacgcaaacagcaacattcagcaaacattcatgaaacaggcgcactttactttcatgaac
acatggcagctgcttcacctcaaagccactgatacccctggcgttgtaacagcgcatgtg
ttgattgatgcaaagatccacacactgaagatcaatgttcctcgacaggtcttcctcaac
cttaagaaagaagagctaccagatgtcgagattgccgggtgtgaggttgagcaagtcaac
tacacgcttccaaatggccatcaatccaagcatctctttaaactcactgtaccagaagac
gtatatttcaacgaggcggagaaattttcactcttgttcaatcatcctagtgtcgagggt
gtgtatgaaaagcaggtgcccttgaatattcgcgcagtccttcgactgggtaatctttgc
actattgacgagcagcaggaggcagttcttggcaagggtcttgaacagggattcgatctg
atgggtctgaaacgacctaccaagccaaagacatatctggagtcgtctccgttggcttat
atctatatatcgcacattactgcgggagatcgccagattttcggcttgttctccactaca
agcgaccaagcttacgtcgtgatactacagaagggaagagactctggttcagatctcccc
aatatcacgagaatgtactcggaactgcttgcaaggcgagcggaagaagctgcaggtacg
aattggcaggattgttttggttatcaagagaaggttactttcaagatcactcaagtgaca
acacggcgcaaggctcatttagagatagccgatgttgtgaggaaactgcgcaaagacgaa
tcacgaccacaaatgatggtgattcaatcgtctcaacataacctcctcgtccatgacgtc
cccattctgggcgagtttcccgtattgcccctcaaatatgacgccactgatagttcattg
ccacctttgggctggcaagcggttgttgcgcgacgtctggttggacattacctggggctg
ggatcctggatcttgcatctcacagctctggcgcgctacggcgatgttccgctgtgtaat
ctcgagcgtgatgaccctcggttcttgatcgacattgcttatgctcgacggctacaagcg
aacggggtggtgttatggtggtcgccagaccctcggccagatcatgctggttatgaaaag
gatgatattaccggctcacttgacacagtcaagatgcctagtattaataaccctggaacg
ttttcgtccgtctgcattgacttagatatccgcaatcttaccatcaatacgattttgaca
tcgtctttgatcaacgaactcgaaggcgccgaatcaatatccttcaatcctacagctgat
gggtctgagattcttgcttcagagaatggatttgcgaacgccggagtattagttcttcgt
gagatggtcaaggcatggtgggcggaggcttgcaaaggcagtactatggccgacgtgctc
gttcaacaccttgtccgatgggttgagaatccagattcgttcatgtacgatcgagcactg
cattactacgtgcaaatgatgtcgcgaaaagcgttccagcaactcatgtcagacttcagg
cgcgtcggctcgcaggtcatctttgcaagcgccaaccgactgattctccagacgaccaaa
gccgaggttggcaatgcgtatgcctacagccagtacatcatcaagtcaatcaagagcaag
tctttattccatttcattgacttggagatcaaggagtactgggactacttggtgtggtac
gatgagttcaactacggcggtcgggctactcaagtggttgcagaatctgaagagcaggat
ttggagactatcatgcactggcagatggcaacattcctgcctgttcgtctacagcccatt
ttccaggactgggtgattgaattcattcagctcatgcataagctaaagcgaccagaaact
aatgatcctaactctactccacgactcactcagctgccaaatcggaagcaggatcccgat
ggcgaaactcagattattcttggcaaggcttttgaaaagccaatgaagaaggtcattgct
ggcctcatcaatcagcaaaagcgcgaactcatgcatccagaactggcagaagactacagc
ttcccctccctgcctggctcacacctccccttgcgcaacccaatccttgagcttgtcaag
tcaataatgcaggtgctgtctcttgataagaatattacactagaagcgagactgttgcgc
aaggagctgctcgcactctttgaaatccgagaattttccaaagatggtacgtttgcaaac
ccttcagagagtttgaaactgctacaggtgtcttgtgacagctgtaccatgacgcgtgac
ctggatctctgccgcgacgaagatttgtttagctcttccggagagaatggcgggcagagc
tggcagtgtggcttctgcaacaccgagtacgatagggtgagcattgaggagcgactactc
gccatggtggaggggtggactacggagtgggcttgtcaggatctcaagtgtgagcgatgc
ggtgcgttgagggtaaatgactttatggagcattgcacttgcagtggtggatggaaggag
gtgttgtcgcgggatgagattgtgcggaagctagctgttatgaggcgagtagcaaagtat
tacggcttgaggatgcttggaaatgtggtggatggattgtctgaggcgttgtaa
DBGET
integrated database retrieval system
