Trichoderma atroviride: 25776427
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Entry
25776427 CDS
T10217
Symbol
TrAtP1_011241
Name
(RefSeq) uncharacterized protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tatv Trichoderma atroviride
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tatv03016
]
25776427 (TrAtP1_011241)
Enzymes [BR:
tatv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
25776427 (TrAtP1_011241)
Transfer RNA biogenesis [BR:
tatv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
25776427 (TrAtP1_011241)
Prokaryotic type
25776427 (TrAtP1_011241)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
25776427
NCBI-ProteinID:
XP_065971125
LinkDB
All DBs
Position
6:complement(join(1977717..1979128,1979233..1979296))
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AA seq
491 aa
AA seq
DB search
MRRLGKVLSTMASDIVRDGVFAINKPCGISSAQVIRECQQAFNPSSFFKPMIDAEIARRL
KEGGQFHRRRAEKKASQVKIGHGGTLDPLATGVLILGIGSATKQLPQFLDCTKTYETIVL
FGASTDTYDRVGRILFKRPYDHITREMVEKELEGFKGKQIQIPPLYSALKMNGKPLYEYA
REGKPIPREIEGREVEVLEIELVEWYEPKKHSHRWPTEEAEAAERNLAEQAWRVTKQQET
ARKLTPEEKEQDDQAVAAHESFKRKFEERQDELIRDAPRKKQRPSKHSAMMSGALGQLPQ
PIHSNKGKNLVPPSPDESTPPPWNDEGPPAARIRLKVTSGFYVRSFCHDLGTKLGSAGLM
AELDRVRQSDFTVGGTNCLEYEDLAKGEEVWAPKVADMLARWNGEPEGQWPGPQAAESQK
KPEKRSPSPSPGASASARSEKRSRSPSVNGASSPARKLQAKGDGEKPTRQTNGAKPPTKA
DDEKSWNGFDD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcgacggcttggaaaagtgctatcaacaatggcttcggacatcgtccgggatggtgtt
tttgccataaacaagccttgcggcatcagctctgcccaggtgatacgagaatgccagcaa
gccttcaacccttcctcattcttcaaaccgatgatcgacgcagagattgcccgacgactg
aaagaaggcggccagttccatcggcgcagggctgagaagaaggcttctcaggtcaagatc
ggccatggaggaactttggatcccttggcgacgggtgtattgattctgggcattggatct
gccacaaagcagcttcctcagttcctcgactgcaccaaaacgtacgagaccattgtctta
ttcggcgcgagtaccgacacctacgatagagtcggccggatcctgttcaagcgtccatat
gatcacatcacacgagagatggtggaaaaggagctggaggggttcaagggcaagcagatc
cagatcccacctctgtactccgcgctcaaaatgaacggcaagcctctctacgaatatgcg
cgcgaaggaaagcctatacccagagagattgaaggaagagaggtcgaagtgctggaaatt
gagcttgtggaatggtacgagcctaagaagcactctcatcgctggccaacagaggaagca
gaagccgctgagcgcaatcttgccgagcaggcctggcgggtcacgaaacaacaggagact
gcgcggaagctcacgccagaggagaaggagcaggatgatcaagcagttgcggcgcatgag
agtttcaagcgcaagttcgaggagcgacaagacgagctcatcagagatgcgccacgtaag
aagcagcgcccttccaagcactctgccatgatgtctggcgcactcggccagctgcctcag
cccatccactcaaacaagggtaaaaatcttgtgcctccttcgcccgacgagagcacccct
ccgccgtggaatgacgaaggtcctcctgctgctcggattcgattaaaggtgacatcaggc
ttctacgtgcgaagcttctgccatgatcttggcaccaagctgggatcggcaggcctcatg
gccgagcttgaccgtgtccgccagagtgatttcaccgtcggcggcaccaactgtctcgag
tacgaagacctggccaagggcgaggaggtttgggcacccaaggtcgccgatatgctggcg
cgatggaatggagagcccgagggacagtggcctggtccccaggcagctgaatcacagaag
aagccagaaaagagaagcccaagcccaagtcctggcgcgtcagcttctgcccgatctgaa
aagcgatcacggtcgccatctgtgaacggcgcctcgtcgcccgctcgtaaactccaggct
aaaggtgatggagagaagcctacacgacaaaccaatggcgccaaacctcccacaaaggcg
gatgatgagaagtcctggaacggatttgatgactga
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