Trichoderma atroviride: 25776428
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Entry
25776428 CDS
T10217
Symbol
TrAtP1_011223
Name
(RefSeq) uncharacterized protein
KO
K10755
replication factor C subunit 2/4
Organism
tatv Trichoderma atroviride
Pathway
tatv03030
DNA replication
tatv03410
Base excision repair
tatv03420
Nucleotide excision repair
tatv03430
Mismatch repair
Brite
DNA replication proteins [BR:
tatv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
25776428 (TrAtP1_011223)
DNA Replication Termination Factors
ELG1-RFC complex
25776428 (TrAtP1_011223)
Chromosome and associated proteins [BR:
tatv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
25776428 (TrAtP1_011223)
DNA repair and recombination proteins [BR:
tatv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
25776428 (TrAtP1_011223)
Check point factors
HRAD17(Rad24)-RFC complex
25776428 (TrAtP1_011223)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
25776428
NCBI-ProteinID:
XP_013948843
UniProt:
G9NFH1
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Position
6:complement(join(1941476..1942224,1942287..1942507,1942580..1942683))
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AA seq
357 aa
AA seq
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MPAAKPEEKGESSNATSKAVLAASSNGSPNYELPWVEKYRPVFLDDVVGNTETIERLKII
AKEGNMPHVIISGMPGIGKTTSVLCLARQLLGESYKEAVLELNASDERGIDVVRNRIKGF
AQKKVTLPAGRHKLVILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQS
RCAILRYAKLTDEQVVKRLMQIIEAEKVEYSDDGLAALVFSAEGDMRQAINNLQSTWAGF
GFVSGDNVFKVVDSPHPIKVQAMLKACYEGNVDSALDTLRELWDLGYSSHDIISTMFKVT
KTMPTLSEHSKLEFIKEIGFTHMKILEGVQTLLQLSGCVARLCKLNMDPKRFKPVSK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgcaaagcctgaagaaaagggcgagtcctccaatgccacgtcaaaggcagtc
cttgcggcatcttccaatggatcgcccaactatgagttgccatgggtggaaaagtaccgt
ccagtgttcctggacgatgtcgtcggcaacacggagactattgagcgattaaagattata
gcaaaggagggaaacatgcctcatgtcatcatctcgggcatgcctggcatcggaaagaca
accagcgttctctgcctcgcccgccagctactgggagaatcgtacaaggaggctgtcctt
gaactcaatgccagtgacgaacgaggtattgacgttgttcgaaacagaataaaaggattt
gcgcaaaagaaggtcacactacctgctggcagacataagctagttatcctcgacgaagcc
gatagcatgacctctggtgcccagcaggcccttcgaagaaccatggaaatctactccaac
accactagattcgcattcgcttgcaaccagtcaaataagattatcgagccgctacagtca
cgatgtgcaatccttcgatatgccaagttgacagacgaacaagtcgtcaagcgattgatg
cagatcatcgaggcggaaaaggtcgaatacagcgatgacggcttagctgccttggtattc
agcgcagagggagacatgcgacaggctatcaataacttgcagtcgacgtgggctggtttc
ggcttcgtctcaggagacaacgtcttcaaggtggtcgattcaccgcatccaatcaaggtg
caggccatgttgaaggcttgctacgagggaaatgtcgactcggctctggataccctccgg
gagctgtgggacttgggatactcgagccacgatattataagcacaatgttcaaagtcaca
aagacaatgccaacgcttagcgaacactcgaagctagagtttatcaaggagattggcttc
acgcatatgaagattctagaaggcgttcagacattacttcagctatcagggtgtgttgcc
cggctatgtaaactgaacatggatcccaaaagatttaaaccggtgtcaaaatag
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