Trichoderma atroviride: 25776573
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Entry
25776573 CDS
T10217
Symbol
TrAtP1_006524
Name
(RefSeq) uncharacterized protein
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
tatv Trichoderma atroviride
Pathway
tatv04138
Autophagy - yeast
tatv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
25776573 (TrAtP1_006524)
04148 Efferocytosis
25776573 (TrAtP1_006524)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tatv04131
]
25776573 (TrAtP1_006524)
Membrane trafficking [BR:
tatv04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
25776573 (TrAtP1_006524)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
TPR_VPS8_2
VPS8_N
TPR_Vps41
zf-RING_Vps41
zf_RING_Vps8_fungal
Beta-prop_EML
zf-RING_5
Beta-prop_HPS5
MbnB_TglH_ChrH
zf-RING_2
zf_RING_Vps8
zf-RING_11
zf-RING_UBOX
Focal_AT
zf-rbx1
PHD_NSD
zf-C3H2C3
WD40_CDC20-Fz
zf-C3HC4_2
zf-C3HC4
DUF760
FhuF
Motif
Other DBs
NCBI-GeneID:
25776573
NCBI-ProteinID:
XP_013938667
UniProt:
G9P9V2
LinkDB
All DBs
Position
3:complement(join(3792054..3796069,3796116..3796551,3796600..3796917))
Genome browser
AA seq
1589 aa
AA seq
DB search
MSDSEDASPNGEPVADYENPSPAVENDDDADVPQLEEQDIPEDPSSVDLEEEKHVVDATV
VEASAQNGDISEITSADASSIDAVPRRAGSPIESVTSGVGDSPSVQGSRVSSPSSSVLPT
AASRSGLGSPTPSFRPFDRRFQSRISSFNALSPRPSSPAFAASHSRHASYSSNFPIDQAD
TDTPSPPWEIVRWTRLKKLNSYAFSESAKRNFGSPTCLAVSASIFLGTSKGIILMFDYSQ
NLKLIIGPGTKAVESGPITALAVSADHTTIAGGHSNGNIFTWDTTRPSRPFLTIPHLDDS
QVQDRTVDGHTPEASVIHLGFLGTRHTALVSADGHGMAFSHLATRGTGPLGRTVKTTRIL
GRYPNAPMPPGKTIKPSTVLAFAPLPLGNIERATDKMGLTAMLTPYLLVIVSTTPVAQTQ
HKSARPKDVPAHSAMTGCLAWFPAVNLKVADSHTGSTFSKAKLAYCWSNVLTVLDVEEIP
GDDADQPPSLRFKARSRWKCEESIAAVQWLSRSVLTVLTISQRLIVLEDRTMRMTEAFDL
LERYIYHTDLFSTQLHTLVENLDENDVSMHGVVADAFYMSFKAYKGRMFLLGFNDVAIGA
LSNWADRLIATMEHGDYIGAIQLATTYYTGDANKLTVGLPDDTDLRHNMVRDKLMEITSA
SLKYAFTQRQKHKASVDDDHLKQLAETCFVACQTIDNIDFLFEELYEWYSDADVEGIFLE
TLEPYILDQTITVVPPTVVKDMVNYYVIKGWESRLEEMICHMETVTLDLDQLTILCKQHN
LYDALTYVWNQALQDYITPMIDLLNLLVPLMSNGDFMAGSTSDDYYGVNAVKIFPYLSYI
LTGRIYPSGETMDEEVAHKAKAEIYWFYFSGKTISWPKGSGKGFLTRTDGEAEPAFPYLR
MILKFDAPSFLSALNEAFEDSFLNDSSEKHSNGNGSKMDMPEEQIFGLTINRQYILSILL
DVMNSTDFAPADTIYLDMFIARNLPKFPQYLLFSGTTLSNVLTGLCNYPGPDLAEDAQLS
AEYLLSVYHPSDMPALMPLIKQAGFYRILKRVYKVDKQYGKLVQTYFEDAEDQDLVFDCI
AECLRPHSELSQRQRQEVLEVIENHAKDLLELSPERSASTLASQETELHQHILASAADAP
GLQHAYLKTLLEPEDPLADGQQALDRYLVEQYVQLMCKFDPHHVSDYISLVQSVDLQLNN
LLPVMEETGVVDAAVVLMANAGQVIEAMERLVRHLGTLESAMEGLLRSHNTKDGEDDSSL
SLQPSAEALLESLQKYVHVGIWLCQEQTKAPRRTSVVSKNKTAQENLSADEALWLNLIIA
CVQVTQNLAPSIQAVANEDVLDEEMLLAKLRSLVQHTFTSLLVSTSSQASDQANGQLGAV
TFSNPASNLSFLRVLRSFLTQVAASSPSLADLRSVLASIFSAYAYEESILRLSNRLIERN
LFTNVNTSVELRQRGWRPRGSTCEACGKRVWGPGLAGNSVFEAWEDKQALEDAARKQRQT
QVAERAKGHARITDRRSKGKSLDMRPSSMLLEQYAGNSNKDQLLGPLVVLACRHIYHQTC
LDALQEKQENGILPRDLDYKCPIDGRSHI
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattctgaagacgcatctcccaatggggagccagtggcggactacgagaaccca
agtcctgccgtagaaaacgatgatgacgccgatgtcccgcagctcgaggaacaagacata
ccagaagaccccagctctgtggatttggaggaggagaagcatgtcgtagatgccacagtt
gtagaagcatctgctcagaatggggacatttccgaaatcacttcggcggacgccagctcc
attgatgcggttccgcgcagagcagggagtcccattgagtctgtcacctctggggtggga
gactctccatcggtccagggctcgcgcgtttcctctccaagcagcagtgtgttgccaaca
gctgcgtcccgttcagggctaggcagcccgacgccgtccttccgaccctttgatcgacga
ttccaatcccgcatatcctcgtttaacgccctcagccctcgtccctcgtctcctgcattt
gcggctagccacagccgccacgcctcttacagctctaattttcctatagatcaagccgat
acagacacaccatcgccaccgtgggaaatcgtaaggtggactagactgaagaagctgaat
agctatgcgttctcagaatcagcgaagcggaattttgggtcgcccacgtgtcttgctgtg
tcggcttcaatttttttgggaacctccaaaggcataatcttaatgtttgactatagccaa
aacctaaaactcatcatcggccccgggactaaagctgttgagtctggtcctattactgcc
ctcgctgtatcagcagatcacacaaccatagccggcggtcattccaacggaaacatcttt
acttgggatacaacacggccttcacggcctttccttacaatcccgcatctagacgactct
caagtacaggataggacagtggatggtcatacgccagaggcctctgtcatccatctagga
tttctggggacccggcacacagctcttgtatccgcagatggccatggcatggctttctcc
catcttgccaccagaggcactgggccactaggcagaacggtcaagaccacgaggatattg
ggccggtatcccaatgcgccaatgcctccaggcaaaacaataaagcctagcaccgttcta
gcctttgcgcctctgccattgggaaacattgaacgtgcgacagacaagatgggactgact
gctatgcttaccccttatttacttgtcattgtctccacgaccccagtggcgcagacgcaa
cacaagtcggcacgtcctaaggatgttccggctcacagcgcgatgacgggctgcttggcc
tggtttcctgctgtgaaccttaaagttgcagactcacacactggatctaccttctcgaaa
gcaaaactggcgtattgttggtctaatgtgctaacagtgctggacgtcgaagagattcct
ggagacgacgctgatcagccaccttcgttgaggtttaaagctcgaagtagatggaaatgt
gaggagtccattgctgctgtgcagtggcttagccgctctgtgttgactgtcttgacgatt
tctcaaagattgattgttctggaggacagaaccatgcgcatgacggaagcgtttgatcta
ttggagagatacatctatcacactgatcttttctccacacaactacacactcttgtggaa
aatctagacgaaaatgatgtatcgatgcatggggttgtagccgacgccttttacatgagc
ttcaaagcatacaaagggagaatgttcctcctaggtttcaacgacgtggctataggcgca
ttatcaaattgggcagaccgacttattgccacaatggagcacggtgattatataggggct
attcagctggctaccacctattatactggcgacgccaacaagttgaccgtcggcctcccc
gacgatactgacctaagacataatatggttcgcgacaagctcatggagataaccagcgcc
tctttgaaatatgcatttacacagagacaaaagcacaaggcatctgtggatgatgatcat
ttgaagcaacttgctgaaacttgttttgtggcttgccaaactattgacaatattgatttt
ctgtttgaagagctatacgaatggtatagcgatgctgatgtcgaaggcatatttctcgaa
acgcttgagccttatatccttgaccaaacgattacggttgtcccacctacagtggttaag
gatatggtaaattactatgttatcaaaggatgggaaagcaggcttgaggagatgatttgc
cacatggagacggtaactctagatctggatcagctcaccattctctgcaagcaacataat
ctatacgatgcgcttacctacgtctggaatcaagctttgcaagattacattaccccaatg
atcgacctactcaatctactggtccccctgatgtctaacggagactttatggccggcagc
acgagcgatgactattacggcgtgaatgcggtcaagatattcccttacctctcctatatt
ctcacgggacgaatttatccaagcggagagacaatggacgaagaggtagcgcataaggcc
aaggcggagatttactggttctatttttctgggaaaactatttcatggcccaaaggcagc
ggcaaagggtttctcaccaggaccgacggagaagcagagcctgcatttccatatctgagg
atgattctcaaatttgatgctcctagtttcctcagcgctttgaatgaagcgtttgaagac
tcgtttctgaatgattcttctgaaaaacactccaatggaaatggatccaagatggacatg
cccgaggaacagatctttggcttgacaattaatcgacagtacattttgtcaatcttgctc
gatgtaatgaattcaacggattttgcccccgccgacacgatatatctcgacatgtttatt
gctcgaaatctccccaaatttcctcaatatctgctgttctctggcacgactttgtcaaac
gtactcacaggactatgcaattaccctggtcccgaccttgctgaggatgcacagctgagt
gctgaatatttgctatcagtttatcatccttcagatatgcctgcgttaatgccattgatc
aagcaggctggcttttatcgaattctgaaacgagtatacaaagtcgacaaacaatatgga
aagcttgtgcaaacatactttgaagacgcagaagaccaagatttggtctttgactgcatt
gcggaatgtttacgacctcatagcgaactgagccaaaggcaaagacaggaagtgttggaa
gttatcgaaaatcacgcaaaggatttgcttgagctgagccccgagcgttcggcctcgacg
cttgcatcgcaggagacagagctgcatcaacatattctagcttctgccgctgacgcccct
ggattacaacatgcatatttaaaaacgctgcttgagccagaagatccgttggcagatggg
caacaagcactcgatcggtatcttgtcgaacaatatgttcagctcatgtgtaagtttgat
ccacatcatgtttcagactacatcagtctcgttcagtcagtcgaccttcaattaaacaac
ctgttacccgttatggaagaaactggtgtggtagatgctgctgtagtcctcatggccaat
gcgggacaagttatcgaggctatggagcgattagtacggcacttgggaaccctcgaatcc
gctatggaaggtcttttgcgatcgcataacacgaaagatggggaggatgatagctctctt
tctctgcagccatcggccgaagcccttttggagagcctgcaaaagtatgtccatgttgga
atctggctgtgtcaggaacagacaaaggcaccgcggaggaccagcgtggtatcgaagaat
aagactgcccaggagaacttgtccgcagatgaagctctctggctgaatctcatcattgcc
tgtgtacaggtgactcagaatttggccccgtctatacaggctgttgccaatgaagatgtg
cttgacgaagagatgcttttggcaaagctgcgatcgcttgtacagcatacattcacttcg
ttgcttgtttctacttcaagtcaggcttcggatcaagcaaacggccagctgggtgctgtt
actttctcaaaccctgcatcgaacctctccttcttgcgagtcttgagatcgttcctcacc
caggtcgcagcatcgtctcccagcttggcagaccttcgtagcgttcttgcgtctatattt
tccgcgtatgcttacgaagagtctattctccgcctgtcgaatcgtcttatagaacgaaac
ttgttcacaaacgtcaacacatctgttgagctccgacagcgtggatggaggccacggggc
tctacctgcgaagcttgtggcaagagagtctggggtccgggccttgctggcaattctgtt
tttgaagcctgggaagacaagcaagcacttgaagatgcagccagaaagcagcgacagaca
caagttgcggagcgagccaaaggccatgcaaggatcacggatcgtaggagcaaggggaag
agcttggacatgcggccctcaagcatgctgctcgagcaatacgccggaaactccaataag
gatcagctgctaggaccgctagttgtgttggcctgtcgacacatctatcaccagacatgc
ctagatgcgttacaagagaagcaagagaatggcatcttgccgagggatcttgattacaag
tgtccgattgatggaagaagtcatatatga
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integrated database retrieval system
