Trichoderma atroviride: 25776721
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Entry
25776721 CDS
T10217
Symbol
TrAtP1_010057
Name
(RefSeq) uncharacterized protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
tatv Trichoderma atroviride
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatv03019
]
25776721 (TrAtP1_010057)
03041 Spliceosome [BR:
tatv03041
]
25776721 (TrAtP1_010057)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
25776721 (TrAtP1_010057)
Spliceosome [BR:
tatv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
25776721 (TrAtP1_010057)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_10
RRM_7
RBD_AKAP-17A
Cas_Cas2CT1978
RRM_8
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
25776721
NCBI-ProteinID:
XP_013945450
UniProt:
G9NQD6
LinkDB
All DBs
Position
5:join(2572704..2573039,2573121..2573216,2573291..2573938,2574005..2574125,2574215..2574411)
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AA seq
465 aa
AA seq
DB search
MADAGAVSTAAQPVGAAAAQNGQGNPTHLPPPPLHIPQNNNPIPTAMTSPRSGVDGGGIL
SPTTGFRRAAPEPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGF
VEYDDPGAADRAMATLNGRRVHQSEIRVNWAYQSNTTTKEDTSNHFHIFVGDLSNEVNDD
ILHQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCN
WANQKGQPSMAQQQAMQAMGMTPTTPFGHHQFPAHGIASYEMILAQTPNWQTTCYVGNLT
PYTTHTDVVPLFQNFGFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCS
WGKDKTPNSQSFDPQQQPYSPQTSQAPGFPGTPTYYPQYGAQYNGQQGNFGGPQAASPAG
YSGSPMGYGGPQSAGGYGRGHQGPNGQWNQNQGQNFNNGFGGYQS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgctggcgctgtctcgaccgctgcgcagcccgtgggcgccgctgccgcccaa
aacggccaaggcaacccaacccacctccccccgcctcctctccatattccgcagaacaac
aacccgatcccgacggccatgacatctccccgctctggcgtcgatggcggcggcatcctc
tcgccgaccacgggcttccgacgagctgcgcccgagcctaacaagcgggccctctacgtt
ggcggcctggaccagcgagtgactgaggatgtgctgcgccagatcttcgagaccacggga
catgtccagaatgtcaagatcatccccgacaagaacgccaaaggctacaactatggcttc
gtggagtacgatgatcctggtgcggccgacagggccatggcaactctcaatggacgaagg
gtccaccagtctgaaattcgagtcaactgggcctatcagtccaacaccacgaccaaggag
gacacctccaaccacttccacatcttcgttggcgacctttcaaatgaggtcaatgatgac
atcctccaccaggccttttctgcctttggctccgtctcggaagctcgcgtcatgtgggac
atgaagacgggcaggtctcgaggctatggcttcgtcgctttccgtgaccggcccgatgcc
gaaaaggccctgagctccatggatggagaatggctcggatcaagggcgattcgctgcaac
tgggccaaccaaaagggccagccttcaatggctcagcagcaggcgatgcaggctatgggc
atgacgccgactactccctttggccaccaccagttccctgcccacggcatcgctagttac
gaaatgatcctggcgcagacgcccaactggcagactacctgctacgtgggaaatctcact
ccgtacacgactcacaccgacgttgtccctctgttccagaactttggatttgtggtcgag
tcgcgattccaggccgatcgcggctttgcattcatcaagatggacacgcatgagaatgcg
gcaatggccatctgccagatgaacggatacaatgtcaacggccgacccttgaagtgcagc
tggggcaaggacaagacgcccaactctcaatcgtttgaccctcagcagcagccgtacagc
cctcagacttctcaggctcctggctttcctggtactcctacctactacccgcagtacgga
gctcaatacaatggacagcagggcaactttggcggcccgcaagccgcctctcctgcagga
tacagcggctcccccatgggttatggcggccctcagagtgccggaggatatggtcgcggg
caccagggtcccaacggccagtggaaccagaaccagggacaaaacttcaacaatggtttc
ggcggctatcagtcgtag
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