Trichoderma atroviride: 25776794
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Entry
25776794 CDS
T10217
Symbol
TrAtP1_008656
Name
(RefSeq) uncharacterized protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tatv Trichoderma atroviride
Pathway
tatv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
25776794 (TrAtP1_008656)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tatv03400
]
25776794 (TrAtP1_008656)
Enzymes [BR:
tatv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
25776794 (TrAtP1_008656)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
25776794 (TrAtP1_008656)
DNA repair and recombination proteins [BR:
tatv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
25776794 (TrAtP1_008656)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fpg-like_C
Fapy_DNA_glyco
Motif
Other DBs
NCBI-GeneID:
25776794
NCBI-ProteinID:
XP_013941800
UniProt:
G9P0B7
LinkDB
All DBs
Position
4:3886595..3887521
Genome browser
AA seq
308 aa
AA seq
DB search
MKESDIAQWPPKFWKFQISTTDKEPVEVAFTDARRFGRVRLVDCPGDSIRKYSPLVENGP
DPVVDKDIFTEEYLRGKIQSRHVPIKALLLDQTVISGIGNWVADETLYQSKIHPEQYSDT
FSGKEIARLHEAIRYVCQLAVDKLGDSNEFPEHWLFNHRWGKGDKSSAPKLPNGEKLAFI
TVGGRTSCYAPGVQKKTGAVVAGAKTESIKSESEKAKPAKGKAVKAEPKEEDDDDKEAVE
EVKPKRSRKQATKVKEELEESDGESPPAKKRRGKAAAEKSKPIPVKKEIKEEVMEEDSGR
RRSSRLRK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaagcgacattgcccaatggcctcccaaattctggaaattccaaatcagcacc
actgacaaggagcccgtcgaagtcgcattcaccgacgcccggagattcggccgcgtgcgg
ctcgtcgactgccctggcgattccattcgaaaatactccccgcttgtggagaatggaccg
gatcccgtggtcgacaaggacatcttcacggaagagtatcttcgcggcaagatacaatcc
cgtcacgtccccatcaaggcgctgttgcttgaccagactgtcatcagcggcatcgggaac
tgggttgccgacgagacgctctaccagtccaagatccatccggaacagtactcggatact
tttagcggcaaggagattgcgcgcctgcacgaggctatccgctatgtctgccagctagca
gtggacaagctcggcgactcgaatgagttccctgaacactggctcttcaatcaccgatgg
ggcaaaggagataagagctcagcgcccaagcttccaaatggcgagaaactcgccttcata
acggttggcggacggactagctgctatgcccctggtgtacaaaagaagactggcgctgtc
gttgccggtgccaaaacagaatctataaagagcgaatcagagaaagccaagcctgcaaag
ggcaaggctgtaaaggccgagcctaaggaagaggatgacgatgacaaggaggcggttgaa
gaagttaagcctaagagatcacgaaagcaggcgacaaaggttaaagaagaattagaagaa
tccgatggagagagcccgcctgccaagaagaggcggggcaaagccgcggcagaaaagtcg
aagcctattcctgttaaaaaggagatcaaagaagaggtgatggaggaagacagtggccgt
cgccggtccagccggttgaggaagtag
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