Trichoderma atroviride: 25776890
Help
Entry
25776890 CDS
T10217
Symbol
TrAtP1_003890
Name
(RefSeq) uncharacterized protein
KO
K27103
serrate RNA effector molecule
Organism
tatv Trichoderma atroviride
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatv03019
]
25776890 (TrAtP1_003890)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
25776890 (TrAtP1_003890)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SERRATE_Ars2_N
ARS2
DUF4187
DUF2096_N
DUF5523
Motif
Other DBs
NCBI-GeneID:
25776890
NCBI-ProteinID:
XP_013939053
UniProt:
G9P628
LinkDB
All DBs
Position
2:complement(join(3378835..3379155,3379225..3380952))
Genome browser
AA seq
682 aa
AA seq
DB search
MNEKIKDDKEHARTGRRREPDRNRGARDSQEEREKEKAKIQVAYDAYKEDLQAKMARAFV
SEHKKEQWFKERYVPEIRDEFKAKLQDFRRSAYGQWEQDLESGIFDEFSLEGIPKSESNG
AGGVIEKEEGEATAANEILGVGDLVPVNGADIRDENQFQPTLLIKTIAPHVSRQNLEAFC
RENLGEEEGGFKWLSLSDPNPSKRYHRIGWVMLHPSSDSAPPMDRANPEDEDGDVAIRSP
PPPASAAEKALEAVNGKTVKDEARGDFVCHVGVHNPPLHPRKKALWDLFSAPERVEKDLR
LVKRLVNKYEEDFGSDFQAIPKIEEKVDDLKNAGRLQPAIPPTSTKKATKSREPGMDEAM
DDDEEAAEEEEEEEGAVEDEEVDDEEMLVKKKQLDLLIEYLRRVFHFCFFCVFESDSVHE
LTRKCAGGHLRRPQSTLTSSARAVARASANGDAFPDKKRSEGDNDVDGESVEGDKKFRNM
SSKTEQQLLRAYNWVKTFEDKLTQILEPSAVDIRKLGGRPVDEAIDEELAKHVKQEDEHK
WRCKVPECTKLFKEDHFWKKHVEKRHGEWLDGLKQEFELINAYVSDPAHIAPSRTDANSN
GHFPPTSGQSASGTPRGFNLQNFSMNGVMGMPGFPMGPGNFPSLFAGMQANNWNSAGDDR
SGGPCPSRRNVWWTRRISFGTV
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaaaattaaagatgataaagaacacgcccggacagggcggagacgagagccc
gacaggaatagaggcgctcgagacagccaagaggagcgtgagaaagaaaaagccaagatt
caagtagcatacgatgcgtataaagaagacctccaagccaagatggccagggctttcgtt
tcggagcacaaaaaagagcaatggttcaaagaaagatatgttcccgaaatcagggacgaa
ttcaaagctaagctccaagattttcgacgaagtgcgtatggccagtgggagcaagattta
gaatctggcatttttgatgagttctctctcgagggcatcccaaaaagcgaaagcaatgga
gctggtggggtaatcgaaaaggaggagggcgaagcaacagccgccaacgaaattttggga
gtcggcgatttggttcccgtgaatggggctgatatccgtgatgaaaatcaatttcagccc
actctgcttatcaagactattgcccctcatgttagtcgccagaatctagaagccttttgc
agagaaaatctcggagaagaggaaggtggcttcaagtggctatctctctccgatccaaac
cctagcaagagatatcaccgtattggctgggttatgcttcatccttcttcggatagcgcg
ccgccaatggatcgcgcaaaccccgaagatgaggatggagacgtagcaataagatcgcca
cctccccctgcttcggccgcagagaaggctctcgaagctgtaaacgggaagacggtcaaa
gatgaggctcggggagactttgtctgccatgtcggagttcacaacccaccccttcatcct
agaaagaaagcgctttgggacctgttttctgcgccagagcgagtcgagaaggatcttcgc
ttggtcaaacggctagtcaacaaatacgaagaagactttggctctgatttccaggccatc
ccgaaaatcgaagaaaaagttgacgatctgaaaaatgctggtcgcctacagcctgctata
ccccccacttcaacgaagaaagccaccaagtctcgagagcctggaatggacgaagcaatg
gacgatgatgaggaggccgctgaagaagaggaagaggaagaaggagcagtcgaagacgag
gaagttgatgacgaggagatgttggtgaaaaagaaacaacttgacctgctcattgagtat
ttgcgccgcgtctttcacttttgcttcttttgcgtatttgaaagcgactctgtgcatgag
ctcacacgtaaatgcgctggtggacatctacgccgacctcagagcactctcacgtcttcc
gccagagccgttgctagggctagtgcaaatggagatgctttccccgacaagaaacgaagc
gagggcgataatgacgttgatggagagtcggttgagggcgacaaaaagtttcgcaacatg
tcttccaaaaccgagcaacagcttctccgcgcgtataactgggtcaaaacctttgaagac
aagcttacgcagatcctggaacccagtgccgtggatattcgcaagcttggtggcagacca
gttgacgaggcaattgatgaagagctggccaaacatgtcaagcaggaggacgagcacaaa
tggagatgcaaagttccagagtgcaccaagcttttcaaagaagatcacttttggaagaag
catgttgaaaagagacatggtgaatggctggatggcttgaaacaagagtttgaacttatc
aacgcatatgtctcagatccagcacatattgctccttcgcgaaccgacgcgaactcaaat
ggccacttcccacctaccagcggccagtcagcatcaggtacccctcgtggcttcaacctg
caaaacttctccatgaatggcgtgatgggtatgcccggatttcccatgggccccggaaac
ttcccctcgttgtttgcaggcatgcaagccaataactggaactctgcgggcgacgaccgc
tcaggggggccctgtccgtcgaggcggaatgtctggtggacgaggcggatatcgttcggc
accgtatga
DBGET
integrated database retrieval system
