Trichoderma atroviride: 25776923
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Entry
25776923 CDS
T10217
Symbol
TrAtP1_011299
Name
(RefSeq) uncharacterized protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
tatv Trichoderma atroviride
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatv03019
]
25776923 (TrAtP1_011299)
03041 Spliceosome [BR:
tatv03041
]
25776923 (TrAtP1_011299)
03036 Chromosome and associated proteins [BR:
tatv03036
]
25776923 (TrAtP1_011299)
Enzymes [BR:
tatv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
25776923 (TrAtP1_011299)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
25776923 (TrAtP1_011299)
mRNA cycle factors
Common to processing body (P body) and stress granule
25776923 (TrAtP1_011299)
Spliceosome [BR:
tatv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
25776923 (TrAtP1_011299)
Chromosome and associated proteins [BR:
tatv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
25776923 (TrAtP1_011299)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
25776923
NCBI-ProteinID:
XP_013939968
UniProt:
G9P7Y7
LinkDB
All DBs
Position
6:complement(join(2160833..2162711,2162775..2162941))
Genome browser
AA seq
681 aa
AA seq
DB search
MADQLDMNGLNLGADGPQSAPGARSYIPPHMRSRGGGGGGGGGGGAAGLNNSAWAGNGGQ
QGGQQAGQQAGYSGGRQGGNWNGDAAAPNFQNSRRGGGSWGGRGGYSGGGGGGGYEGGHG
GGGHAARGSGDGQWRDGKHVPGPQNARVERELFGTADDPSKQHTGINFEKYDDIPVEASG
RDVPEPVHQFTTPPLDEHLCTNIEMARYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTG
GFLFPILSQAFIHGPSAVPANAAGQFGRQRKAYPTSLILAPTRELVSQIYEESRKFAYRS
WVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRML
DMGFEPQIRRIVEGEDMPNVNDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSE
NITQKVEFVEDIDKRSVLLDILHTHAGGLTLIFVETKRMADSLSDFLINQSFPATSIHGD
RTQRERERALEYFRNGRCPILVATAVAARGLDIPNVTHVVNYDLPTDVDDYVHRIGRTGR
AGNTGIATAFFNRGNRGIVRELLDLLKEANQEVPPFLEAIARESSFGGGGRGGGRSRPGG
AGRGNANRDFRKFGGGGFGGSGGGFSNSPQGGFSNYGGAQGGSNYSGGGGGGGGGGFSGG
YGGGGGSYGNPGGAGAQSSWW
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccaacttgacatgaacggcctcaacctcggtgctgatggccctcagtctgct
cccggggctcgatcctacatcccgcctcacatgcgaagccgcggtggcggcggtggtggt
ggcggcggtggcggcgctgctggcctgaacaacagcgcctgggctggtaacggtggccaa
caaggtggccagcaagccggccagcaagccggctatagtggtggccgtcagggcggcaac
tggaacggtgatgctgcagcacctaactttcagaacagtcgtcgtggtggtggcagctgg
ggcggtcgcggaggctactctggcggtggcggcggaggtggttatgaaggcggccacggc
ggtggtggccacgctgctcgcggctctggagatggacaatggcgggacggaaagcatgtt
cccggcccccaaaacgcccgtgtcgagcgtgagctttttggtacagccgacgatccttcc
aagcagcacactggtatcaactttgagaagtacgacgacattcctgtcgaagcttctggt
cgtgacgttcccgagcccgttcaccagttcaccactcctcctctggatgagcacctctgc
accaacatcgagatggcccgctacaaggtccccactcctgttcagaaatactccatcccc
atcgtcatgggtggccgtgatctcatggcttgtgcccagactggttccggcaagactggt
ggtttcctcttccccatcctgtctcaggctttcatccacggcccctccgctgtccctgcc
aacgctgctggacagtttggccgtcagcgcaaggcctaccccacctcccttattctcgcc
cccactcgagaactggtttctcagatttacgaagagtctcgcaagttcgcctaccgatct
tgggtccgcccttgcgtggtctacggtggtgccgatattggctctcagcttcgccagatt
gagcgcggatgcgatcttcttgtcgccacccccggtcgtttggtagatctcattgagcga
ggccgcatctccctgtgcaacattaagtatcttgtgctcgatgaggccgatcgtatgctg
gacatgggtttcgagccccagattcgccgtattgtcgagggcgaggacatgcccaatgtc
aacgaccgccagaccctcatgttctcagccaccttcccccgcgacattcagatgcttgcc
agagatttcctcaaggactacgtcttcttgtccgtcggccgtgttggttccacctctgag
aacattacccaaaaggtcgaatttgtcgaggacattgacaagcgctctgttctgctcgat
atcctccacacccacgctggcggcttgaccctcatcttcgtcgagaccaagcgtatggcc
gactccctttccgattttctcatcaaccagagcttccccgctacttccatccacggagac
cgaacccagcgtgagcgtgaacgcgctcttgagtacttccgcaacggacgatgccccatc
ctggttgctactgctgtcgcggcccgtggtctcgatatccccaacgtcactcacgttgtc
aactacgatcttcccactgatgtggacgactacgttcaccgaattggtcgtaccggtcgt
gccggaaacactggtatcgcgactgcctttttcaaccgtggcaaccgtggtattgtccgc
gagctcctcgaccttctcaaggaggccaaccaggaggttccccccttccttgaggctatt
gcccgtgagtcttccttcggcggtggtggccgcggcggtggtcgctctcgccctggcggt
gctggtcgtggtaacgccaaccgtgacttccgtaaatttggcggcggtggctttggcggc
tccggcggtggtttcagcaacagccctcagggaggcttcagcaactatggcggtgctcag
ggaggctccaactatagtggcggcggcggcggtggtggtggtggtggcttcagcggcggc
tacggtggtggtggcggcagctacggcaaccctggcggtgctggagctcagtcttcctgg
tggtaa
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integrated database retrieval system
