Trichoderma atroviride: 25777459
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Entry
25777459 CDS
T10217
Symbol
TrAtP1_004372
Name
(RefSeq) uncharacterized protein
KO
K18715
nucleoporin NUP159
Organism
tatv Trichoderma atroviride
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatv03019
]
25777459 (TrAtP1_004372)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
25777459 (TrAtP1_004372)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_NUP159_NUP214
Nucleoporin_FG
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
CDC45
Nop14
PPP4R2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
WD40
Motif
Other DBs
NCBI-GeneID:
25777459
NCBI-ProteinID:
XP_065968355
LinkDB
All DBs
Position
2:complement(join(4758086..4759911,4759987..4761765,4761823..4762471,4762609..4762986))
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AA seq
1543 aa
AA seq
DB search
MVQAAQFPLHLQSLLLHSPLQQNNRRVFSPHRFFAAPSPFSRSLPPNWAPAAPGAASAGG
SSSDDGTLQRGAADPCSSASRIVNEIRSSSEATTTMAFGFNASNNTMNGGAGNVNAGPDL
ETIQTEALGFLAIAGDAKVRLTSPWESLPTPTSSLLSVASKRGLVAAAGPDQVIIATTES
IRKAFEGPKNGDSDIRSFEPQLKIPMPMRVSQLVFTADENYLVLSAESGGGLAVYEVQSL
LQGSSNSAFELSTNGEALRSLVPNPMVPELFAIVTSGGNLHIANLQERKISNALKSQVSC
TAWSSKGKQLCAGLADGTIHQMTPEGEGKADIPKPPNMGDCHVSSLTWLENNLFLAIHTT
SGSPPSSVYHVITRQNPSTFSFQKLMDPVDPIGSEKIPHHTILRLRDFPPDLQDLLIVSS
TATADIGLLTRSKSALASDKPAESITGVFTTTELLDDSKRPTLPMTDTMDDSTPIGIALD
LSSKDKVYKPIPSDEELEESPTPLPGFWVLTHEGVLCSWWVIYTDSIKKGAAYPGLTAVQ
GDAVPMSASTPAAAATAAAASPFASSPSPFSAPASAAPSFGSSAQLGQKASPWGSGGAAA
AATPSGGAAFGSSTFGSAAPAAAFGKSSAFGQSSQLGMRASPWASAGAGMGAGTGAAAAS
TPAFGQSGFSSFANKASQSPFGSTAASTAQPSAPASSGGFAGFASQGGFASLAGSNTNTT
GSSVFGSGGKLAGTGSAFGTGGAFGSGSEATAFSSKPSGNAFGSTQDKPAGSVFGSTPFK
LESSFKPDPSVQEDNNKTTAPSGSSMFGSAFGSALNDAENKVPDEDMDTGEPSESAQAGS
TTPLATPAPSRFGAPSSATGTSSVFGQPSKPAATPGLFGAKTDAPQTTGSGLFGSGGTTP
KPATGGLFGAKTEPGKPAFGSTSFGKPAAEAPVNKDSSATSAASSPFGNATASKQSSLFS
SDKTATVKDNPFATTTSKNTATRPNPFLTSTKPSEEKSTVIEDAPLPPDPTKASIFSKVA
PSASPASFALPTSKNGAPIPESEDDEDEEDEEEEQEEEEEEQEEEEEEEEEEEEEEEEEE
ESELDDNASEGSGIDVAEDLSPTHTPEQQRSRPLFGELSQSASGGTPSVRVPGSLQGGVG
NRAAGVASQALGAKRSQLVASTTAGKVKTATEDSFVKQSRKLRERQQAEEGRVLIDEEDE
SVQRLLASEVEGKLVLDEFIAHSNVAPPAQESIPAQVEAVYRDINSMIDTLGLNARSVRA
FTKGHTDNRIPDGRTPDDLEDPDDWVLCEIGDLGEILEIELMGDLDDGRVQDLSDKLEAC
QDLARDMHRLRAKQEDLKRIIMTRVDPNQADAARSLPLSAEQQAQQNDLRREYTKFSKLL
AEAEEALTLLKTRMASISSASGRGSTNVPTVEAVMKTITKMTSMVEKRSGDVDVLETQLR
RMRLESPSRDGSPFRTSQARRSLLAPDATPSRNFRQSFSGSLSGSVMSLSGSMHTPRKKV
SGFSREEKGDLMDKRTKRQAVLSRLKDSVQKKGVSVWNMEDIE
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaggcggcgcagttcccgttgcacctccaatcgctactcttgcacagtccgctg
cagcagaacaaccgacgcgtcttctcgcctcaccgattcttcgccgcgccctcgcccttc
tcgcggtctctgcctccgaattgggccccggcagctccaggcgcagcttctgccggcggg
agctccagcgacgacgggactttgcagcgcggcgccgcagacccatgttcgtctgccagt
cggattgtaaacgagatccggagctcgtctgaggcgacgacgacaatggcgtttggattc
aacgcctcgaacaacaccatgaatggaggcgcgggaaatgtcaatgcaggccctgacctg
gaaactattcagacggaggccctcggcttcctggccattgctggcgatgccaaagtgcgt
ctcacttctccctgggagtcgcttcctactcctacctcgtcgctcctaagcgttgcctca
aagagaggcctggttgctgccgccggccctgaccaagtcatcatcgccaccactgagtcg
attcgaaaagcctttgagggacccaaaaatggcgattcggatattcgaagcttcgagcct
cagctcaagatccctatgcctatgcgggtgtcgcagctcgtgtttaccgccgacgagaat
tacctggtgctgtcagcggaatctggtggcggccttgccgtttacgaggtgcagagcctt
ctccagggatcttccaattccgcgtttgagctatcgacaaatggggaggcattgaggtca
ctggtaccaaatcccatggtcccagagctctttgctattgttaccagtggcggcaacctc
catattgcaaacctccaggagcggaaaatcagcaacgcgctgaagagccaggttagctgt
actgcctggagttcaaaaggcaaacagctttgtgccggattggctgatggaactattcac
caaatgacgcctgagggagagggcaaggccgatattcccaagcctcccaatatgggcgac
tgccatgtatcatcactcacctggcttgagaataacctcttccttgccattcatacaact
agcggatctcctccctcttcagtctaccacgtcatcacacgccaaaacccctcgaccttt
tcgttccaaaaactgatggatcccgttgaccctattggatctgagaagatcccccaccat
accatactgagactgagagacttccctcccgatcttcaggatctcctcatcgtctcatct
acggcaacagctgatatcggtctgctgactcgatccaaaagcgcccttgcaagcgataag
cctgccgaatccattacaggcgtctttacgactaccgaactactcgatgactctaagcga
cccacccttccgatgactgacaccatggatgattcgacccccatcggaattgccctggac
ctatctagcaaggacaaagtctataagcccataccgtcggatgaggagcttgaggaatcg
ccgacgcctttaccaggattctgggttctgactcacgaaggtgtactctgctcctggtgg
gtcatttatactgactctatcaagaaaggcgccgcctatccggggttgacagcagttcaa
ggtgatgcggtccctatgtcagcatcaacaccagccgcagccgcaaccgcagctgcagcc
tcaccttttgccagctcaccctcgcccttttccgcgcccgcttcagctgctccttctttt
gggtcgtcagcacagctgggccaaaaagcctctccatggggatcagggggtgcggccgct
gctgctacgccaagtggtggagcagcttttggatcaagtacttttggctcagcagcaccg
gctgctgcatttggaaagtcgagcgcctttggtcaatcatcccagctgggcatgcgagcc
agtccttgggcctctgctggcgccggcatgggagcaggaacaggagcggcagcagcttcc
accccagcttttggccaatcaggcttttctagctttgcaaacaaagcctctcaaagtcca
tttggaagcactgctgcaagcactgctcaaccctctgcgcccgcttcatcgggagggttc
gcggggtttgcctctcaaggaggatttgcttctcttgctggtagcaatactaatactaca
gggtctagtgtttttggtagtggtggtaagctggctggaactggaagcgcattcggaact
ggaggtgcgtttggatctggttcagaagctaccgccttctcatcaaagccctcaggaaat
gcctttggttctactcaagacaagccagccggcagcgtttttgggtccactccattcaaa
ctagaaagctcctttaagcctgatccatctgttcaagaagacaataacaaaacaactgca
ccctctggatcgtcaatgtttggatcggcttttggatcagccctcaacgatgccgaaaat
aaggtcccagacgaagatatggatactggcgaaccttccgagtctgcgcaagctggttcg
acaaccccgttagcaacacccgcaccgtcaagattcggtgccccgtcctcagcaactggc
acaagttcagttttcggccaaccaagcaaacctgccgctacacctggcctttttggtgcc
aaaacggatgctccacaaactactggatctggattatttggatctggaggcactaccccc
aagccagcaactggcggcttatttggagccaaaactgagccaggcaaacctgcatttggg
tctacgtcttttggaaagcctgcggctgaggctcctgtaaacaaagactcatccgccaca
tcggccgcttctagccctttcggaaacgccacagcctccaagcaaagtagcctattctct
tcggataaaactgcaacggtaaaggacaacccctttgccacaaccacgtcaaagaatacg
gcaacaaggcccaatcctttcttgaccagcaccaagccttcggaggaaaaatcaacagta
atcgaagacgcccctctaccccctgatccaaccaaggcaagcattttctccaaagtagca
ccttcggcatcaccggcgagcttcgcgctccctacatccaagaacggagctcctattcca
gagtccgaagacgacgaggatgaagaggatgaggaagaagagcaagaggaagaggaagaa
gagcaagaagaagaggaggaggaggaggaggaagaagaagaagaagaagaagaagaagaa
gagagcgaattagatgacaatgcatctgagggtagcggcattgatgtagctgaagacctc
agccctacacacactcccgaacagcaacgatcacgaccactctttggggagctcagccag
agcgcatccgggggcaccccaagcgttcgagtacccggctctttgcaaggcggagtggga
aaccgcgcagcgggcgtggcttctcaggcactgggtgctaagcgttcgcagctcgttgcg
tcaactactgcgggcaaggtcaagactgccactgaagactcattcgttaagcagtcaaga
aaattgcgagagcgacaacaggccgaagagggtcgagtattaattgatgaagaggatgaa
agcgtacaaagactcctcgcatccgaggttgaaggcaaactagtactggatgaattcatt
gctcattcaaatgttgctcctccagcccaggagagcattcctgcgcaggtcgaggctgtt
taccgagatatcaactcaatgattgatacccttggactcaatgctcggtctgtaagggcc
tttacaaagggtcataccgataaccgcattccagatggaagaacgcccgacgacctcgaa
gatccagacgattgggttctatgtgaaattggtgaccttggggagattctcgagattgag
cttatgggcgacttggacgatggccgagtacaggacttgagcgataaactcgaggcctgc
caagacctagccagggacatgcaccggctccgagccaagcaggaggatctgaagaggatt
atcatgacgagagtagatccaaatcaggccgatgctgcgcggtcgctccctcttagtgca
gaacagcaagcacagcagaatgacctgaggcgggagtacaccaaattctcaaagcttctc
gccgaagcagaggaggcattgactcttctcaaaacccgcatggcgtcgatctcaagcgcc
tcgggcaggggatccacaaacgttcctactgtggaagctgtgatgaagacaatcaccaaa
atgacgagcatggtagagaagcgcagtggagatgtcgatgttttggaaacacagctgcga
aggatgcgactagagtctcctagtagggatgggtctcctttccgaacgtcgcaggcaagg
aggagcttactcgctccagatgcgacaccatctcgcaacttccgccagagcttttctggt
agtctatccgggagtgtcatgtctttgtccggttcgatgcatacaccgcggaagaaggtc
agcggtttcagcagggaggagaaaggagatctcatggataagagaaccaagcggcaggcg
gtgctttccagattgaaagacagcgtgcagaagaagggtgtcagtgtatggaatatggaa
gatatcgagtaa
DBGET
integrated database retrieval system
