Trichoderma atroviride: 25777487
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Entry
25777487 CDS
T10217
Symbol
TrAtP1_004537
Name
(RefSeq) uncharacterized protein
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
tatv Trichoderma atroviride
Brite
Transcription machinery [BR:
tatv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
25777487 (TrAtP1_004537)
RSC complex
25777487 (TrAtP1_004537)
Chromosome and associated proteins [BR:
tatv03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
25777487 (TrAtP1_004537)
SWI/SNF complex
25777487 (TrAtP1_004537)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
25777487
NCBI-ProteinID:
XP_065968427
LinkDB
All DBs
Position
2:join(5193013..5193105,5193196..5197182,5197254..5197454)
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AA seq
1426 aa
AA seq
DB search
MASVQIPPPVQHPGAPMPTGATKQQAEEVFRKLKQMKESGVPPNDPEYMKASQFLLNFQQ
QHHMRRNQQQYIQAQQQMQQNAQAVQNGNANGVNGTVNGVQRPQQGVPQTTQAAALPNAI
GTAAAASNASATTTPNTPAQPNSSTSSHFTTKQLGLLRQQIHAFKLLGKNAGISVALQQA
IFQQRQQRQAAVTTSAQTAAASKTPQPGSDATKPTPNGVDAAAAQDDALSLPKPHTYKTV
KSPYGSSMIRPSIKYFDHAQRKNRWFIPGVFPTGIDFDHLRYEREVVVFNRMSQRYSELK
NLPANIAHWDTTKENVEVDDSVKVKAVIEMKSLALYAKQRALREKIARQMMHYDNLAMTT
NRTNYRRMKKQNVREARITEKLEKQQRDARENREKKKHNDFLRAIYNHRAEITETAAAQK
NKSHKLSRLMYSHHFNIEKEEQKRIERTAKQRLQALKANDEEAYLKLLDQAKDTRITHLL
KQTDGFLHQLASSVKAQQRQAAETYGTDMGEFIDEESEIDEEDSGKKIDYYAVAHRIREE
VTQQASILVGGSLKEYQVKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEQKQ
QSGPYLVIVPLSTLTNWNLEFEKWAPSVSRVVYKGPPNTRKLQQEKIRQGRFQVLLTTYE
YIIKDRPILSKIKWFHMIIDEGHRMKNTQSKLSATIQQYYNTRFRLILTGTPLQNNLSEL
WAMLNFVLPNIFKSVKTFDEWFNTPFANTGGQDKMELTEEEQILVIRRLHKVLRPFLLRR
LKKDVEKDLPDKTEKVIKCKFSALQSKLYKQMVTHNKLVVSDGKGGKTGARGLSNMIMQL
RKLCNHPFVFDVVENVMNPLNISNDLLWRTAGKFELLDRVLPKYKATGHRVLMFFQMTAI
MDIMEDYLRYRSYKYLRLDGTTKSDERSDLLRDFNAPGSDYFLFLLSTRAGGLGLNLQTA
DTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMDGKV
IQAGRFDNKSSETDRDAMLRTLLETADMAESGEQEEMEDEELNMLLARNDDELVTFQKLD
EERQKESIYGGPRGKPRLMGEDELPDIYLNEGNPIEDDAEEIILGRGARERTKVKYDDGL
TEEQWLMAVDDDEDSPEAAAARKQARKDKREANRTKRLGGPDNSPSVSRASTEELETPKK
RGRKPGSKNEKRKAEDVDDEPPAKKRRGPQGRPSKSAAHNDSRLGSQQREVLQKSLRALY
DSLMNLEVDDIEPPAEDDESDAGKRLIIGPFVKLPPKREYADYYVIIQNPICMNHIQTRI
KKEEYNSLSDLRKDFDLLIRNCQTYNEDGSILYQDAKTMDEFFTKKYQEELDAHPELLDL
EPSKAGSAAPSGNGSTPQPSGTRIKIISSAAREANGARSAAQSDED
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagtacagatcccgccccccgtgcagcaccctggcgcgccaatgcctaccggg
gcgactaaacaacaggccgaagaggtctttcggaaactcaaacaaatgaaagaatcgggc
gtcccgccaaacgatcccgagtatatgaaggcgtcgcaattcctgctcaacttccaacag
cagcaccacatgcgacgaaaccagcagcagtacatccaggcccagcagcagatgcagcag
aatgctcaggccgtccagaacggcaacgccaacggagtcaatggaaccgtcaatggtgtc
cagcgaccgcagcagggcgtgcctcagacgacgcaggctgctgctctgccaaacgccata
ggaacggcggctgctgcatctaatgcatctgctaccactaccccgaatacccctgcacag
ccgaattcgagtacatcaagccactttacaacaaagcagcttggtctacttaggcaacag
attcatgccttcaagcttctcggcaaaaacgcagggatttcagttgcgctacagcaagct
atcttccagcagcgtcagcagcgccaagcagctgtcacgacttcagcccaaactgccgct
gcatcaaagactccccagcctggctcggatgctacaaagcccacaccaaatggtgttgat
gctgccgccgcccaagatgacgctctctccctccctaagccccatacatacaagactgtc
aagtcaccatatggcagcagtatgattcggccctctatcaaatatttcgaccatgcacag
cggaagaatcgctggtttattcctggcgtcttcccgaccggcattgactttgaccacctg
cgttacgagagagaagtcgtcgtcttcaaccgtatgagccagcgatattcagagctgaag
aatctgcccgccaacatcgcccactgggatacgaccaaggagaacgtcgaagttgacgac
tctgtaaaagtcaaggctgtcattgaaatgaagagcttggctttgtatgctaagcagcga
gctctccgtgagaagattgcgcgtcagatgatgcactacgataatctggcaatgacgacc
aaccggacaaactatcgtcgtatgaagaagcagaatgtccgggaggctcgcattacagag
aagctggagaagcagcagcgtgatgctcgcgagaatcgcgaaaagaagaagcacaacgac
ttcctccgagccatttataaccaccgcgccgagatcaccgagaccgcggcggctcagaag
aacaaatcacacaagcttagtaggctcatgtactctcaccatttcaacattgagaaggaa
gagcagaagcgtattgagagaacggccaagcagcgtctgcaggctctcaaggccaacgac
gaagaggcgtatctcaaactgcttgaccaggccaaggatacccgtattacgcatctgctt
aagcagaccgacggtttcttgcaccagcttgcctcttcagtcaaggctcaacagcgccaa
gctgccgagacatatggcacagacatgggcgagtttattgacgaagagagtgaaatcgac
gaggaagatagcggcaagaagattgactactacgctgtggcccatcgcatccgcgaagaa
gtcacccagcaggcaagcattcttgttggaggctcgctgaaggaataccaagtcaagggt
ctgcagtggatgatttcactatacaataacaacctcaacggtatccttgcagatgaaatg
ggtctcggaaagacaattcagaccattagtctgatcacctacctaattgagcagaagcag
cagagcggaccttacttggtcattgtccctctaagtaccctgaccaactggaacctcgaa
ttcgaaaagtgggccccgtctgtatctcgcgtcgtttacaagggcccccccaatacccgt
aagctacagcaagagaagattcgccagggacgcttccaggtactgttgactacctacgag
tacattatcaaagatcgacccattctcagcaagattaagtggttccacatgatcatcgac
gaaggtcaccgtatgaagaacacgcaatccaagctcagcgcgactatccagcagtactac
aacacccgtttccgacttattctcaccggtacccctcttcagaacaatctgtctgagctg
tgggccatgctcaactttgtcctgccaaacattttcaaatcagtcaagacctttgacgag
tggttcaacaccccctttgccaacactggtggccaggacaagatggaactcactgaagaa
gagcagattctcgtcattcgacgtctgcacaaggtcttgcggcctttcctcctgcgtcgt
ttgaagaaggatgtcgagaaagacttgcccgacaagacggaaaaggtcatcaagtgcaag
ttttctgcgctgcagtccaagctctacaagcaaatggttacccacaacaagctggttgtc
agcgatggcaagggtggcaagactggtgcccgtggtctgagcaacatgattatgcagctg
cgaaagctctgcaaccatccgtttgtctttgatgtggtcgagaatgtcatgaatcccctc
aacatcagcaacgatcttctttggagaacggctggtaaattcgagttgctggaccgagtt
ctgcccaaatacaaggcaactggccacagagttttgatgttcttccaaatgacggccatc
atggatattatggaagactaccttcgttaccgaagctacaagtatctgcgtttggacggt
acgacaaaatcggatgagcgatccgatctcctgagagacttcaatgcgcccggctcagat
tactttttgttcttgctgtccactcgtgctggtggtttgggtctcaacttgcagacggca
gatactgtcattatctacgactctgattggaatcctcaccaggatttgcaggcacaggat
cgtgcccatcgtatcggtcagaagaacgaggtgcgaattcttcgtctgattagctctaat
tccgtcgaggagaagattttggaacgtgctcggttcaagctagatatggacggcaaagtt
atccaagcaggtcgttttgataacaaatcctccgagacagatcgtgacgccatgcttcga
actctgctggaaaccgccgatatggctgagtctggcgagcaggaagagatggaagacgaa
gagctcaacatgttacttgcccgtaacgatgacgaactcgtcaccttccagaagcttgac
gaagagcgacaaaaagaatccatctatggtggtccgagaggaaaaccacgactcatgggc
gaagacgaattacccgacatctatctcaacgaaggcaaccctattgaggacgacgctgaa
gagattattcttggtcgcggtgctcgtgagcgaaccaaggtgaaatatgacgatggcctg
acagaagaacagtggctgatggcggtggacgacgacgaggattctccagaggcggcagca
gcgcgtaaacaggcacgcaaagataagagagaggccaataggaccaagagattgggaggc
ccggacaactcgccttccgttagtcgcgccagcacggaggaattggagacacccaagaag
agaggtcgcaaacccggaagcaagaacgagaagcggaaggcagaagacgtggacgatgag
cctcctgccaagaagcgacgtggccctcagggccgacccagcaaatctgccgcccataac
gattctcggctgggatctcagcaacgagaggtgcttcaaaagagtttgcgagcattgtac
gatagcctgatgaacttggaagtggatgatattgaaccgcctgccgaggacgacgaatcc
gacgccggtaagcgtctcattatcgggccgtttgtcaagctgcccccgaaacgcgagtat
gccgactactatgtgattatccaaaaccctatttgcatgaatcatatacagacgcgtatc
aagaaggaagagtataatagcttgagcgatcttcgcaaagactttgacttgctgatacgc
aactgtcaaacgtacaacgaagacggaagtatcctgtatcaggatgcgaaaacgatggat
gaattctttacgaagaaataccaagaggagctggacgcgcaccctgagcttcttgatcta
gagcccagtaaggcaggatcagcagcgccttcaggcaacggaagcacaccacagccaagc
ggaactcggatcaagatcatctctagcgcagcgcgggaagccaatggggcacgatctgcc
gcacagagcgatgaggactga
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