Trichoderma atroviride: 25777529
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Entry
25777529 CDS
T10217
Symbol
TrAtP1_009237
Name
(RefSeq) uncharacterized protein
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
tatv Trichoderma atroviride
Pathway
tatv03440
Homologous recombination
tatv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
25777529 (TrAtP1_009237)
03460 Fanconi anemia pathway
25777529 (TrAtP1_009237)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tatv03400
]
25777529 (TrAtP1_009237)
DNA repair and recombination proteins [BR:
tatv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
25777529 (TrAtP1_009237)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
ORC5_C
EME1-MUS81_C
Motif
Other DBs
NCBI-GeneID:
25777529
NCBI-ProteinID:
XP_013949025
UniProt:
G9NEH0
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All DBs
Position
5:complement(231660..233834)
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AA seq
724 aa
AA seq
DB search
MAPDVIDLVSSSPSLPPIRRPTETASSTVTSEGRNHYRRPRSPELFISSDFDVPDDELLA
QSPRNAKRLRISISPPRPAVDPPRAAQPPFLSATSNRPNRLDFDPIEFTSSIDPDTPRPQ
QNTNHSLAGAPAARPHVAKQTTQDPLQISLGSDPFASSPLLAPLPKANQRPERPDRPEQR
TTTIVDEFADAFPSSPLPLLPPPTREPHRPKEQATAIHTIIDVDDFSDPFISSQNANLQP
AKIPTPRRAVSVEVVEHSRKRKHWDPISSSAPEEPPRAPPQAKTLSDSQRTGPTVISIDS
DSGASSEDEFPDIADFNLSRVRPRARSPIRRSQSDVITSRSSRPKSTATTTKTAEQKARD
RDAQAAAKAAEKERKRLEKEQLKEAKALEKERAAALAEVNKVRTDKKVSTPEMILDMPSS
VTEGLKVQLGTLLDGLSVEHTTWDSPVANAFKWRRKVTSRFDEEMGRWEPIPPRIMPEKH
ALILLAAEEFVEMAVNDTLDSSVSETKRHFPGHDLIYILEGLTPWTRKNRSLRNRRFAAG
VRAQDQAAAPEATPASRRRRNNAAPEEYISEGIVEDAMLQLQVEYDVLIHHTATQLETAQ
WIVAFTQHISTIPYKKLREKLTSSAGFCMESGQVRTGDDARDTYVRMLQEIARVTAPIAY
GIVSEFDTVSKLVTGLEQGGPLRLESVRKSANKDGAVSDRSVGQAVSRRIHKVFTGKDEM
STDV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgatgtgattgatctcgtctcatccagtccgtctctaccgccaatacgtcga
ccaacagaaacagcgtcctccacagtcactagcgaagggcggaatcattaccggcggcct
cgttcaccagagctctttatttcatcagacttcgatgtgcctgacgatgaattactcgcc
caaagcccgagaaacgccaagcgactgcggatatcgatatcaccacctcgaccagctgta
gatccgcctcgagcggctcagcctccctttctcagcgccacatccaacaggccaaaccga
ctagattttgatcccatagagtttacaagctctatagatccagataccccgaggcctcag
caaaacaccaaccattctctcgcaggtgctccagccgcacggcctcacgtagcgaagcaa
acaactcaggatcctctacaaatctccctgggttctgatccatttgccagctctccactc
ttggcgcctcttccaaaggcaaaccagaggccagaaaggccagacaggccagaacagcgt
acaacgaccattgtcgacgaatttgccgatgcttttccaagctcaccacttcctctgcta
ccaccccccacacgcgaaccacacagaccaaaggagcaagccacagccatacatacgata
atcgatgtggatgacttctcggatccattcattagctctcagaatgccaacctgcaaccc
gccaaaatccccaccccacgcagagcagtttctgtagaagtggtggagcattctcgcaaa
cgcaagcactgggatcccatttcaagctcggccccagaagaacctccacgagcgccacct
caggcaaagaccctgagtgattcacagagaactgggcctacagttattagtatcgactcg
gattcaggagcctcatccgaagatgaatttccagacattgccgacttcaacttgtctcgc
gtcagaccccgcgctcgctcccccattcgtcgctctcaaagcgatgtaatcacttcaaga
agcagcaggcctaaatcaacagccacaaccacaaaaacggcagaacagaaggcgcgcgac
agagatgcccaagctgctgccaaagctgccgaaaaggagcgaaagagactggagaaggag
cagctcaaagaggccaaagctttggaaaaagagcgtgctgctgcattggctgaagtcaac
aaggttcgcacagacaaaaaggtctcaacgcctgaaatgatcttggacatgccgtcaagc
gtgaccgagggattaaaggtccagctagggaccctgctagacggactaagtgtcgagcat
actacctgggatagtcctgtcgccaacgccttcaagtggcgcagaaaggtcacaagtcga
tttgacgaagagatggggcgctgggaacctattccaccgcggattatgcctgagaaacat
gccttgattcttctcgcagcagaagaatttgtcgaaatggctgtcaacgacactctagac
tcgagcgtctctgagaccaagagacatttccccgggcacgacctcatctacatcctcgag
ggcttaacgccttggacgaggaagaatcgcagcctccgaaaccgcagattcgcagctgga
gtgcgtgcccaggatcaagctgctgctccagaagctactccagcctcccgcagacgccgt
aacaatgcagcccctgaggagtacatttcggaaggcatcgtcgaagacgccatgctacag
ctacaagtcgagtacgacgtattgattcaccacaccgctacacagcttgagactgcccag
tggattgtcgcctttactcagcacatttcgaccattccctacaagaaactgcgcgaaaag
ctgacttcctcggcgggtttttgcatggagagcggacaggtccgcaccggcgacgatgct
cgcgatacatatgtccggatgctacaggagattgcgcgcgtcacggctccgatagcttac
ggcatcgtctcggagtttgataccgtgagcaagctcgtgacggggcttgagcagggaggg
cctctgagattggagagcgtgcgcaagagtgcgaataaagacggtgctgtttcggacagg
agtgtgggacaggctgtgagcaggaggatacacaaggtgtttacgggcaaggatgagatg
agtacggatgtatga
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integrated database retrieval system
