Trichoderma atroviride: 25777675
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Entry
25777675 CDS
T10217
Symbol
TrAtP1_009877
Name
(RefSeq) uncharacterized protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tatv Trichoderma atroviride
Pathway
tatv03022
Basal transcription factors
tatv03420
Nucleotide excision repair
Brite
Enzymes [BR:
tatv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
25777675 (TrAtP1_009877)
Transcription machinery [BR:
tatv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
25777675 (TrAtP1_009877)
Chromosome and associated proteins [BR:
tatv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
25777675 (TrAtP1_009877)
DNA repair and recombination proteins [BR:
tatv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
25777675 (TrAtP1_009877)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
25777675
NCBI-ProteinID:
XP_065970577
LinkDB
All DBs
Position
5:complement(join(1933284..1934645,1934710..1934807,1934876..1935206,1935269..1935385,1935460..1935713,1935789..1935920,1935970..1935989,1936147..1936158,1936209..1936225))
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AA seq
780 aa
AA seq
DB search
MRFKIDDLPVYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHMPEKRKLIYCS
RTMSEIEKALVELQSLMKYRAEELGYEEEFRGLGLTSRKNLCLHPSVKREKSGSVVDARC
RSLTAGFVKEKKDRGENVDVCVYHDNLDLLEPHNLIPNGVWSFDALLKYGEEHKQCPYFT
ARRMMQYCNVVIFSYHYLLDPKIAERVTKDFSKDCIVVFDEAHNIDNVCIESLSTDITED
SIRKATRSAQHLERRIAEMRETDQEQLQNEYEKLVQGLREADESRQEDAFMANPALPDDL
LKEAVPGNIRRAEHFVAFLKRFLEYLKTRMKVRQVISETPLSFLAHLKEHTFIERKPLRF
CAERLTSLVRTLELMNIEDYQALQEVATFATLVATYEKGFLLILEPYESDTAEVPNPTLH
FTCLDAAIAIRPVFERFYSVIITSGTISPLEMYPKMLDFATVIQESYSMTLARRSFLPMI
VTRGSDQASVSSSFQVRNEPSVVRNYGNLLTEFAKITPDGLVVFFPSYLYMESIISMWQG
MGILDEVWKYKLILVETPDAQETSLALETYRTACCNGRGAILLCVARGKVSEGIDFDHQY
GRTVLCIGVPFQYTESRILKARLEFLRETYRIKENDFLSFDAMRHAAQCLGRVLRGKDDY
GVMVLADRRFQKKRTQLPKWINQGLSDADTNLSTDMAVSSARRFLKTMAQPFRSKDQEGI
STWGYEDLMQHQRKIEEERGDEPPPPSMANARAAANDNRTTTYESDYEDIDQDMMELEGF
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgagatttaagatagatgatttgcctgtctacatgtgtgatctgaaaaaaacgctcgat
gcgggtggccattgtgtcttggagatgccgtcagggaccggcaagaccgtgtctctgctg
tccctcattgttgcgtaccagcagcatatgcccgagaagcgaaaactcatctactgctct
cgaacaatgtcggagatcgaaaaggctctagtcgagctgcagtctctaatgaagtatcgc
gccgaggagttgggttacgaagaagagttccgcggccttggtctgacaagtcgaaagaac
ttgtgcctgcatccctctgtcaagagggaaaagagtggctcagttgttgatgcccgttgc
agaagtttgactgcgggctttgtcaaggaaaagaaggatcgtggtgaaaatgtggatgtc
tgcgtctatcacgataatcttgatctccttgaaccccataacttgatacccaacggcgta
tggtcatttgacgcgctcctgaaatatggagaagagcacaagcaatgtccatatttcact
gcacgacgcatgatgcaatattgcaatgtagtcattttctcatatcactacctcctcgat
ccaaagattgccgagcgtgtcacaaaagacttttccaaagactgcatcgtagtctttgat
gaagctcacaacattgacaacgtctgcatcgagtcacttagcactgacatcactgaggac
tcaatacgcaaagctacccgcagcgcccaacacctggagcgacgaattgccgagatgcga
gagacggatcaagagcagcttcagaatgaatacgaaaagcttgttcaggggcttcgcgaa
gcggatgaatcaaggcaggaggatgccttcatggccaatccagctttgcccgatgatctt
ctaaaagaggctgttcctgggaacatcaggcgagccgagcattttgtggcctttttgaaa
agatttctggaatatctcaagacgagaatgaaggtccgccaagtcatctcggaaacgccg
ctatcatttttggctcacttgaaagagcatacttttatcgagaggaagccgctgcgcttt
tgcgctgagcggctaacatcgcttgtcaggacccttgagcttatgaatatcgaagactac
caagcacttcaagaagtagcaacattcgccactctcgttgcgacgtatgagaagggcttt
ttgctgattttagaaccatacgaatccgataccgccgaagttcctaacccaacccttcat
tttacctgtcttgacgccgccatcgccatccgacccgtgtttgaaaggttctactcggtc
atcataacctctggcaccatctctcccctcgaaatgtatcctaaaatgctggattttgcc
acggtgatacaggagtcctatagtatgactctcgcgcggagatccttccttccgatgatt
gtaactcgcggaagcgaccaagcttcggtctcgtctagctttcaggttcggaatgaaccc
agtgtcgttcgaaactacggtaatctcttgacggagtttgccaagattacccccgacggc
ttggttgtcttcttcccgtcatatctatacatggaatccatcattagcatgtggcagggc
atgggcatcctcgacgaggtttggaagtacaaattgatcttggtggaaacccctgacgca
caggaaacatcgctggccctggaaacctaccgaactgcgtgctgcaacggaagaggagca
atcttgctttgcgtcgctcgaggaaaggtatctgagggcatcgacttcgatcaccaatac
ggccgaactgtgctgtgtatcggggttccattccaatacacagaatcacgaatcttaaaa
gcaagattagagtttttgcgagagacataccgcatcaaagaaaacgacttcttgtccttt
gatgccatgcgccacgctgcccaatgtctgggccgtgtcttgcgaggcaaagacgactac
ggagtcatggtactggccgatcgacgtttccagaagaagagaacccagctgccgaaatgg
atcaaccagggcttgtcggacgccgatacgaatctgagtaccgacatggccgtcagcagt
gcccgacgatttctaaagaccatggcacagccgttccggagcaaagaccaagagggcatc
agtacctggggatacgaagacctgatgcaacaccagagaaagattgaagaggagagggga
gatgagcctcctcctccttcaatggcaaatgcacgggcggcagcgaatgacaacaggact
actacgtatgagtctgattatgaagatatagatcaggatatgatggaattggaaggcttt
tag
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integrated database retrieval system
