Trichoderma atroviride: 25777818
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Entry
25777818 CDS
T10217
Symbol
TrAtP1_005872
Name
(RefSeq) uncharacterized protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tatv Trichoderma atroviride
Pathway
tatv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
25777818 (TrAtP1_005872)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tatv03021
]
25777818 (TrAtP1_005872)
03036 Chromosome and associated proteins [BR:
tatv03036
]
25777818 (TrAtP1_005872)
Transcription machinery [BR:
tatv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
25777818 (TrAtP1_005872)
Chromosome and associated proteins [BR:
tatv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
25777818 (TrAtP1_005872)
PBAF complex
25777818 (TrAtP1_005872)
GBAF(ncBAF) complex
25777818 (TrAtP1_005872)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
T7_gp14
DUF3439
DUF7074
Motif
Other DBs
NCBI-GeneID:
25777818
NCBI-ProteinID:
XP_065968979
LinkDB
All DBs
Position
3:join(1908758..1908869,1908927..1909483,1909542..1910945)
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AA seq
690 aa
AA seq
DB search
MDDSTAYDSPGNATSPAPNSALAQPPSQTNAKGLDSQDVQMSEESSSAEHVPQSGGSPTA
SAAVDNSGEVPSDTPAPNTTRLDEEMGDVSEDAKGLPAGSTGAPVASDTGVETKTKEAFE
SAARDHLISQTHAIVLPSYSTWFDMNSIHEIERKAMAEFFNNRNRSKTPAVYKDYRDFMI
NTYRLNPVEYLTMTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDADQRPSHVGPPFTGH
FKIICDTPRGLQPWQPAADPVVLEGKKNRDTEEKANSSVPNKGDLNLGIGRNIYEASAKG
TPITKSEGQKNGDDISTEESAKAPVAKVNCHQCGNDCTRIYYHSSQSDARAKAKFDLCPN
CFTEGRLPASHTSSMYSKVENPTYTSILDRDAPWTDAEILRLLEGLERFDDDWGEIAEHV
GTRTREECVLQFLQLDIEEKYLDSEAPTNPPTGLSMLGGQHGHLPFNQVDNPVMSVVGFL
ASLADPASTAAAANKSADELKRNLRKQLERANQTDDAEAADKKDTEVDKAESMDVDFRQT
VVTTTTTTSTTTKTSLASIPLASIGARGAVFASHEEREMTRLVSAAANVMLQKLELKLKY
FDEMEELLREERRELERGRQQLFLDRLAFKRQVQTVQDTLNAAAEAGGVQGSRMAQDIAM
EGEKLGFQTVLDGQSMLPPTGNGQVKTFEA
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggatgactctacagcctatgactcgccgggaaacgcgacatcgccagctcccaactct
gcgcttgcacagccgccatcgcagaccaatgccaaaggcttagattctcaagacgtgcag
atgtctgaagaatcttcgagcgcagaacatgtcccacagagcggcggaagtcctacggcc
agtgcggctgtagacaactcaggcgaggtccccagtgatactcctgcgccaaacaccact
cgtctcgatgaagagatgggcgatgtatccgaggacgcaaagggcctgcctgccggatcg
actggcgctccagtagcatcggacactggagtagaaaccaaaacgaaggaagcgtttgaa
tctgctgctagagaccatctcatctctcagacgcatgccatcgttctgccaagctatagt
acctggtttgacatgaacagcattcacgagattgagcgcaaggcgatggccgagtttttc
aacaatcgtaaccgaagcaaaacgccagcagtctacaaagactatcgcgactttatgatc
aatacataccgacttaacccggttgagtatctcacgatgacagcatgccgtcgcaaccta
gctggagatgtttgtgccataatgcgcgttcacgccttcctcgaacaatggggcctaatc
aactaccaggttgatgctgatcaacgaccatcgcacgttgggcccccgtttacaggccac
ttcaaaattatatgcgacacgccgcgaggccttcaaccttggcagcctgccgcagaccct
gttgttctagagggcaaaaagaatcgtgacactgaagaaaaggccaactcatcggtccct
aataaaggcgacttgaacctgggaattggccggaatatttatgaagccagtgctaaaggg
actccgattacaaaatcagaaggccaaaagaacggcgatgacatctctaccgaggagagc
gcaaaggctcccgtggccaaggtcaactgccaccaatgtggaaacgactgcaccaggata
tactatcacagctcccaatcggatgccagagcgaaagctaaattcgatctatgcccaaat
tgcttcaccgagggccgattacccgcgagccacacctctagcatgtattccaaagtggaa
aacccaacatatacatccatcttggaccgagatgcaccatggactgacgcggaaatccta
cgacttttggaaggtttggagcgatttgatgacgattggggagaaattgcagagcatgtt
ggtactcgcaccagagaagaatgcgtgcttcagttccttcaattggacattgaagagaag
tacctcgattccgaggcacctacgaacccgcctacaggcttatctatgctgggaggtcaa
cacggccacctccctttcaaccaagtggacaaccccgttatgtctgtcgtgggctttttg
gcaagcttagcagatccagctagcactgcggcggcagcaaataaatcagcggacgagctc
aagcgtaacctgcgaaaacagcttgaaagagcaaaccagacagatgatgccgaagcggca
gacaagaaagataccgaagtggataaggcagagtcgatggatgtagatttccggcagaca
gtcgtgaccacgacaactacaacatcaacaacaacaaagacatctcttgcatctattcct
ttggcctccattggcgctcgtggggccgtatttgcgtctcatgaagaacgagagatgact
cgattagtttcggcagctgccaacgtgatgctccagaaactagagttgaagcttaaatac
tttgacgagatggaagagctactgcgtgaagaacgcagagagttagaacgtggccgacaa
caactattcttggacaggctcgccttcaaaagacaagtacagactgtccaagacacattg
aacgcggccgctgaggcaggtggagtgcaagggtctcgaatggcgcaggatattgcaatg
gaaggcgagaaattgggttttcagaccgtactggatggccaatcaatgctgccacccacc
ggcaacggccaggtgaaaacatttgaagcataa
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