Trichoderma atroviride: 25777841
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Entry
25777841 CDS
T10217
Symbol
TrAtP1_005399
Name
(RefSeq) uncharacterized protein
KO
K14848
ribosome assembly protein RRB1
Organism
tatv Trichoderma atroviride
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tatv03009
]
25777841 (TrAtP1_005399)
Ribosome biogenesis [BR:
tatv03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
25777841 (TrAtP1_005399)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
WD40_WDHD1_1st
Beta-prop_RIG_2nd
CAF1C_H4-bd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
25777841
NCBI-ProteinID:
XP_013944825
UniProt:
G9NRJ7
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All DBs
Position
3:complement(join(527464..528722,528820..529021))
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AA seq
486 aa
AA seq
DB search
MSKRTADHQDDAPLKGGERPEQMDIDMDKDMGEFEDEFEDEFESEDEIIEAGVDGRPDAE
REAEEKEHAMEVDQGTFIVGRSKLEPGQTLAPDLTTYEMLHRLNTPWPCLSFDIVKDSLG
DNRKAYPHTMYTVTGTQAESAKAHENELLVVKFSGLSKMERGDEDSDSDDDDEDSDPILE
SKSIPLNSCTNRIRTHQIPNQDPSLPPTTLTATMTESASVFIHDVTPHLTSFDTPGTVIT
AQQNKPISTIRAHKSEGYAVDWSPLVPGGKLLTGDNDGLIYMTTRTDGGGWVTDNRPFQG
HASSVEEIQWSPSEQSVFASASSDGTVRIWDVRSKSRKPAITVQVSNYDVNVMSWSRHTT
NLLASGADDGTWAVWDLRQWKGNDSKPQPVASFNYHKEQICSIEWHPTDDSIIALAAADN
TVTLWDLAVELDDEESKDTAGVKDVPPQLLFVHYLKDVREVHWHPQIPGSLIATGEEFSV
FRTISV
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgcacagcagaccaccaggacgatgcgccgctcaagggcggcgagcgcccc
gagcagatggacatcgatatggacaaggacatgggcgagttcgaagatgagtttgaagac
gaatttgagagcgaagacgaaatcatcgaggccggtgtggatggacggccagacgccgag
agagaggccgaagagaaagagcacgccatggaagttgaccagggaacctttattgtcgga
cgaagcaagctcgagcctggccagaccctggcgccggatttgaccacctacgaaatgctg
caccgcctcaacacgccctggccgtgcctgtcctttgacattgtcaaggattccctcggc
gacaaccgcaaagcctacccccacaccatgtacaccgtcacgggaacgcaagccgagtcg
gcaaaggcccacgagaacgagctgctggtcgtcaagttcagcggcctcagcaagatggag
cgcggcgacgaggattctgattccgacgacgacgacgaagattcagaccccatcctggag
agcaagtcgatccctctcaactcttgcaccaaccgcatccgcacgcaccagatccccaac
caggatccttctctgcctcccacgacgctcacggcaaccatgactgagtccgcgagcgtc
ttcatccacgacgttactcctcacctcacctcgttcgatacgcccggcactgtcattacg
gcccagcagaataagcctatttctaccattagagcacacaagtctgagggttatgccgtg
gactggtcaccgctcgtccccggtggaaagctcctgactggcgacaacgacggcctcatc
tacatgacgacgcgcactgatggcggcggctgggtcaccgacaacagaccattccagggc
cacgccagcagcgtagaggaaatccagtggtctccctccgagcagtccgtcttcgcatct
gcctccagcgacggcaccgttcgcatctgggacgttcgatccaagtcgaggaaacccgcc
atcacggtccaagtctccaactacgacgtcaacgtcatgtcctggtccaggcacaccacc
aacctgctcgcctccggagccgacgacggaacctgggctgtctgggatcttagacaatgg
aagggcaatgacagcaagccccagccagtggccagcttcaactaccacaaggagcaaatt
tgcagtatcgagtggcatcccacggacgattctattattgcgctggctgcggctgataac
accgttacgctgtgggatctggctgtcgagctggacgacgaggagagcaaggacactgct
ggcgtcaaggacgtgccgcctcagctgctgtttgttcactacctcaaggatgtcagggag
gtgcactggcacccgcagattccgggcagcttgattgctaccggtgaggaattcagcgtg
ttccggactatcagtgtttaa
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