Trichoderma atroviride: 25777949
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Entry
25777949 CDS
T10217
Symbol
TrAtP1_003736
Name
(RefSeq) uncharacterized protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
tatv Trichoderma atroviride
Pathway
tatv03022
Basal transcription factors
tatv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
25777949 (TrAtP1_003736)
09124 Replication and repair
03420 Nucleotide excision repair
25777949 (TrAtP1_003736)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tatv03021
]
25777949 (TrAtP1_003736)
03400 DNA repair and recombination proteins [BR:
tatv03400
]
25777949 (TrAtP1_003736)
Transcription machinery [BR:
tatv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
25777949 (TrAtP1_003736)
DNA repair and recombination proteins [BR:
tatv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
25777949 (TrAtP1_003736)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Rogdi_lz
TackOD1
Motif
Other DBs
NCBI-GeneID:
25777949
NCBI-ProteinID:
XP_013943602
UniProt:
G9NWU1
LinkDB
All DBs
Position
2:complement(2820008..2821102)
Genome browser
AA seq
364 aa
AA seq
DB search
MPSTSRSTTRSPPSTAPPSLLSIVIDTNPRAWAALESRLSLSQAISNTLVFVNAHLAFSN
TNQVAVIAAHVNRAVWLYPAAAAQKPPAAARDYSGDVQMQDVSAETNNSSSSPSANKYPQ
FAQIESSVFSSIQSLMAETTVQDLDQVTTQLSGALTLALCRINKASQALSASDTTLSNAA
PVNSAAPPPVKSRIVVISVSDSEPSQYIPTMNAVFAAAHNQVAIDTIALAGDSTFLQQAC
FNTNGIFLKASNPQGLLTYLMFGLIPDTEARESIITPAHDTVDFRTACFCHGRVVDTGFV
CSVCLSIFCEPPENAECLTCGTVLALGNYGAKPAVVPRRKKKKKKIANGSGREETGSATG
TPKP
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgacgtctcggagcactacgaggtcacctccgtcgacagcccccccctcgctc
ctctccatcgtcatcgacaccaacccacgcgcctgggccgccctcgaatcccgcctctcc
ctctcccaggcaatctccaacaccctcgtctttgtcaacgcccacctcgccttcagcaac
accaaccaggtcgccgtcatagccgcacacgtcaaccgcgccgtatggctgtatcccgct
gctgctgctcagaagccaccggcggcagcaagggactactcgggggacgtccagatgcag
gatgtgtcggctgaaacaaacaattcttcttcttccccgtcggccaacaagtacccgcag
tttgcgcagatcgagtcctccgtcttctcgtctatccagagcctcatggcggagactacg
gtgcaagacctcgaccaagtaacgacacaactctccggagcgctgaccctcgccctctgc
cgcatcaacaaggcctcccaagctctcagcgcgtcagacaccaccctctccaacgctgcg
cccgtcaattccgccgcccctcctcccgtcaaaagccgaatcgtcgtcatctccgtctca
gattccgaaccgtcgcaatatatccccaccatgaatgccgtctttgcggccgctcacaat
caagtcgccattgacaccattgctctagccggcgactcaacctttctccaacaagcatgt
ttcaacaccaacggcatcttcctcaaggcgtccaaccctcaaggcctgctgacctaccta
atgtttggtctcatccccgatacagaagctcgcgagtccatcattacgcctgcccatgac
actgtcgattttcgaacggcctgcttttgccacggcagggtcgtcgataccggatttgtc
tgctccgtctgtctgagtatattctgcgaacctccagaaaacgctgaatgtctcacgtgc
ggtactgtgctggcacttggtaactacggtgctaaacccgctgttgtacctcgaaggaag
aagaagaagaagaagattgccaacggtagcggacgtgaggagacagggagtgctacaggg
acgccaaagccttga
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