Trichoderma atroviride: 25778014
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Entry
25778014 CDS
T10217
Symbol
TrAtP1_008900
Name
(RefSeq) uncharacterized protein
KO
K22803
structural maintenance of chromosomes protein 5
Organism
tatv Trichoderma atroviride
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tatv03400
]
25778014 (TrAtP1_008900)
DNA repair and recombination proteins [BR:
tatv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
25778014 (TrAtP1_008900)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
BLOC1_2
AAA_29
RsgA_GTPase
CRA
AAA
AAA_27
Motif
Other DBs
NCBI-GeneID:
25778014
NCBI-ProteinID:
XP_065970182
LinkDB
All DBs
Position
4:complement(join(4565242..4565614,4565680..4566415,4566473..4566545,4566607..4567497,4567560..4568813))
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AA seq
1108 aa
AA seq
DB search
MSSSTSRRRRRGVEDEDDSGADDRTSPFGDDSPKRRRVDTESEGDEQRRGRNIAADHTSF
QPGAIVRVSVQNFVTYEKAEFLPGPNLNMVIGPNGTGKSSLVCAICLGLGYSPKNLGRAG
TVKEFVKNGKDTATIEIELHKRPQDRTNFVVRVQIRREQNIQKWWLNGKETTHKKIQSLI
HMLKIQVDNLCQFLPQDRVVEFAACTPVELLHETLRAAAPEEMQKWHRQLQEHHKDKKDI
AEAVHADTETLKNLQTRQQGLQADVDRIREREEIQERVSNLKGALVIAQYQEARNNHLAA
KERRKEAENKLKLLERESGPSLEAVNRKQVYAQEIEAAIPSRVKAVKDTQVAAQSLAQEI
STAVDDVKEWSNKIGAERTGFDEKRKEVAASKSRITTLVADLKNRPSDFSAGEWNQKIRA
EEHNLREVEADQRRLNSDLERVKDDGRKKMDELRKLKADIESLDTQEGQQLNFMRRNFPE
ISTAWDWVQENQGKFEKEVFAPPMLCCSVKDERYSDQVQALLQTDDFLCFTAQTKHDYRL
LTDQLYREMSLSVVIRTCSQPLASFRPPVALAEAQSLGLDGFALNYLDGPEPVLAMLCAD
KRLHQSGVSVKDHSDDEYEKLVNHGRISQWAAGKQQYLVRRRKEYGPSAMTTITKRIQPG
RFWTSQPVDSQEKVELNRRQTEVAGEAEIMKVEYRELRLKNGTFEEQKAEIQGKIEQLRT
EKNALQREFSKWQMIPQKIESEERHKEANEQAMREARERIVELGFEWDKAVVERAKLVLR
HQEALSQIGKAHTDLIEAKIRLIEAKSDIEGLKARNSDIMEKLEQEKLVVQQATDEATLA
RELGRGLSDKVRELISENPDKKDTYTSLAENKLAAEIEMDISAEQANLELIHAANPNVIR
EFEKREQEIAKLTKKMDASNGKLATITQQLDDLMGKWEPKLDALVSKVNDAFAYNFEQIS
CAGEVRVNKTEDFDQWALDIMVKFRENESLQQLNAHRQSGGERAVSTIFFLMALQSMAQS
PFRVVDEINQGMDPRNERMVHERMVEIACREHTSQYFLITPKLLTGLRYDPKMRVLCIAS
GEHMPKDGTKLNFRRCLKIQKRIMAAAA
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgagttccagcacctcgcgccgtcgacggcgtggggtcgaggacgaagatgacagcggc
gcagacgaccggacatcaccatttggagacgacagcccgaaacgacggcgagtagacacc
gaatccgagggagatgaacaacgacgcggccgaaacattgcagcagaccacaccagcttc
cagccaggcgccatcgtccgggtcagcgtgcagaacttcgtgacgtacgaaaaggccgag
tttctacctggcccaaatctcaacatggtcatcggtccaaacggtacgggcaaaagttcc
ttggtttgcgccatctgtctagggcttggatatagccccaaaaaccttggccgcgcaggc
actgttaaagagtttgtcaagaatggaaaggatacagcaacgatcgagatcgagctgcac
aaacggcctcaagatcggaccaactttgttgttcgagtgcagattcgccgagagcagaat
atccagaaatggtggttgaatggcaaagagacgacccataagaagatacagtcattgata
catatgctcaagattcaggtagacaatctgtgtcagtttcttcctcaggacagagtcgtc
gaatttgctgcctgcacgccggtggaattgctgcatgaaactctgcgcgctgctgccccc
gaggaaatgcaaaaatggcatcgacagctccaagaacatcacaaggacaaaaaggacatc
gcggaagccgtgcacgcggataccgaaaccctgaagaatctacaaacccgccagcaaggc
ctgcaagccgacgtggatagaatccgtgagcgagaagaaattcaggagcgagtgagcaac
ttaaaaggtgcattagtaattgcccaataccaggaggctcgcaacaaccacttggccgca
aaggagcgcagaaaagaggcagagaataaactgaaacttcttgagcgggaaagtgggcca
tcattggaggcagtcaaccggaaacaggtctacgcccaggaaatcgaggccgccatccca
tcgagggtaaaggcggttaaggatactcaagtggcagcccaaagcctagcccaagaaata
agcactgcagtggacgatgtcaaagagtggtccaataagataggtgctgagcgcacagga
tttgatgagaagaggaaagaggtagcagcatcaaaatcaagaatcactactcttgtagca
gacttgaagaatcggccgtcagatttcagtgcgggcgagtggaatcaaaaaattcgagcc
gaggagcacaatctacgagaagttgaagcagaccagcgccgattaaattctgatttggaa
agggttaaagatgatgggagaaagaagatggacgagctgcggaaactcaaggcagatatc
gagtctctagatactcaagagggccagcagctaaactttatgcggaggaatttccccgag
atttctacggcctgggattgggttcaagagaaccaaggcaaattcgaaaaagaggttttt
gcgccacctatgctatgctgctcggttaaggacgaacgctactcggatcaggttcaagct
ctgctgcagactgatgacttcctctgctttacagcacaaactaaacatgactacagatta
ttgactgaccagctctaccgggagatgagtttatctgtcgtcatcagaacctgctcgcaa
cctctcgcttcctttagaccacctgttgctctcgctgaagctcagtcactgggcctcgat
ggctttgccctcaactacttggacggtcctgagccagtgcttgccatgctgtgtgctgac
aagaggttgcatcaatcaggtgtctcggtgaaagatcacagtgatgatgagtatgaaaag
cttgtcaatcacggtcgaataagccagtgggcagccggaaagcaacagtacttggttcgt
cgacgaaaagagtacggccccagtgccatgacaacaattaccaagaggatacaacctgga
agattttggacttctcagcccgtagactcacaagagaaggttgagttgaacaggcggcaa
accgaagttgccggagaagcagaaataatgaaagtagaatacagggagttgagactaaag
aatggaacctttgaagaacaaaaggccgagatacaagggaaaattgaacaactgaggaca
gagaagaatgctctgcaaagggaattttccaaatggcagatgatcccccaaaagatagaa
tctgaggaaagacacaaagaagcgaatgagcaggccatgcgcgaggcccgggaaagaatc
gtggagctcggatttgaatgggataaagcagtggtggaaagagccaagcttgttctacgc
caccaggaggctctcagtcaaatcggaaaagctcataccgatcttatcgaagccaagata
cgacttattgaagccaagtcagatattgagggcctcaaagctcgcaactctgatattatg
gagaagcttgaacaagaaaagcttgtagtgcagcaagccaccgatgaagctactctggcc
cgagaactgggtcgcgggctatctgacaaggttcgagaacttatcagcgagaatcctgac
aagaaggatacatatacctcgttggccgaaaacaaactggctgcggagattgagatggat
atatctgctgagcaggcaaacctcgagctcatccatgcagccaatcccaacgtcattcgg
gagtttgagaagcgcgagcaggaaatcgccaagctgacgaagaagatggacgcttcaaac
ggcaagcttgccaccatcactcagcagctggatgatttgatgggcaaatgggagcccaag
ctggatgctctagtgtccaaagtcaacgacgctttcgcctacaactttgagcagattagc
tgtgctggtgaagttcgcgttaataaaactgaagattttgaccagtgggctttagacatc
atggtcaaattccgagaaaacgaatccctccaacaactcaacgcgcatcgccaatccggt
ggcgagcgcgccgtctccaccatcttcttcctcatggccctccagtccatggcccagtcc
cccttccgcgtcgtcgacgagatcaaccagggcatggatccccgcaacgaacgcatggtc
cacgagcgcatggtcgaaatcgcctgccgcgagcacacgagccagtacttcctcatcacg
cccaagctgctcaccggcctgcggtacgatcccaagatgagggtgctttgcatcgccagc
ggggaacacatgcccaaggatgggaccaagctcaactttaggcggtgcttgaagattcag
aagcgcattatggcggctgcagcgtaa
DBGET
integrated database retrieval system
