Trichoderma atroviride: 25778074
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Entry
25778074 CDS
T10217
Symbol
TrAtP1_001895
Name
(RefSeq) uncharacterized protein
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
tatv Trichoderma atroviride
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tatv03400
]
25778074 (TrAtP1_001895)
Enzymes [BR:
tatv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
25778074 (TrAtP1_001895)
DNA repair and recombination proteins [BR:
tatv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
25778074 (TrAtP1_001895)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos2
PsaO_TMD
Motif
Other DBs
NCBI-GeneID:
25778074
NCBI-ProteinID:
XP_065967277
LinkDB
All DBs
Position
1:join(5265642..5265669,5265723..5265735,5265792..5265837,5265906..5266038,5266096..5267805,5268103..5268221)
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AA seq
682 aa
AA seq
DB search
MGFRITTWNVNGIRNPFGYQPWREKRTFQAMFDILEADIVVMQETKIQRKDLTDDMVLVP
GWDVYFSLPKHKKGYSGVAIYTRNATCAPIKAEEGILGVLCPPKSSTQFRNLPKDQQIGG
YPRPEQLPGNIDELLLDSEGRCVILEFPAFVLLGVYSPANRDESRVDFRMEYLQALDARV
RNLISEGKQVVLMGDLNVSRSESDSTNVAETLRKEGLSIEEWMNVPSRRLFNHLIYGGTV
QGDRDEGREQPALWDLCREFHPTREGMNTCWDTKRNTRPANNGSRIDYVLCSNGLKDWFT
EADIQEGLMGSDHCPVYATIADVVTTDTEQVPLLAVMNPTSMVTRDGQRLREWHMKDVLP
LSAKLIPEFDRRQSIRDMFTKSAGTKLSSFPSSPALESAQAQDASSRVGGSTHLDQASEL
SNRAEYRLGMSDASDSSKLKPLTESRSEAPPRAKRAAGFVDPLSDGGSLKRSKKSNGAMS
VNPSLMAEKNARSTTTVSTKGQKTLQGFFKPVSSLAANRVAEKTGSDPDANADRRANSNA
PSPYLQQTMTLPTELLSHHTSSAPSSQRENNDGADWSGKSPGSESQAKQNPRPISLQTET
NQIFDPVQAKESWSKLLGRRVLPRCEHNEPCISLVTKKPGVNCGRSFYICARPLGPSGEK
EKDSEWRCGTFIWSSDWNGSQS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgggatttcgtataacgacatggaatgtaaacggcattagaaatccatttggatatcag
ccatggagagagaagcgcacgttccaggcaatgttcgatattctcgaggccgatattgtc
gttatgcaagagacaaagatacagcgaaaggatttaaccgatgatatggttcttgttccc
gggtgggatgtttacttcagcctgcctaagcataagaaagggtactccggtgttgctatt
tacacgcgaaatgcgacttgtgcgcctattaaagctgaagaaggaatcctaggagtgctc
tgtcctccaaagtcatcaacacaatttcgcaatttgcccaaagatcaacaaattgggggc
tatccaagacctgagcaacttccggggaacatcgatgaactgctgttggattctgaagga
agatgcgtcatccttgaatttccagcattcgtactgctaggtgtttatagcccagccaat
cgcgacgagtctcgagtagattttcgcatggaatatcttcaagcacttgacgctcgggta
cgaaatctgatctcggagggcaagcaagtggttttgatgggggacctcaatgtgagccgt
tccgagtctgattcaaccaacgttgctgaaactcttcgaaaagagggcctgagcatcgag
gaatggatgaacgtaccttcgcgtcgcctcttcaatcatctaatctacggaggcacggtg
caaggcgatcgcgatgaaggacgggagcagcctgcgctgtgggatctatgcagagaattc
caccccacacgcgagggcatgaacacatgttgggacaccaaacggaacacacggccggcc
aacaacggcagccgtattgactacgtgctatgcagcaatgggctgaaagactggtttaca
gaagctgacattcaggagggcttaatgggatctgatcactgcccggtgtatgccacgata
gctgatgtcgtgacgactgacacggaacaggtaccgctgttggccgttatgaatccaact
agcatggtgaccagagatggtcaacgcctccgggaatggcatatgaaggatgtgttgcct
ttgtcagccaaactgatccccgagttcgaccgccggcaaagcatccgagatatgttcacg
aagagcgctggtactaaactttcgagctttccttcgtcaccagcgctagaaagcgcccag
gctcaagacgccagctcaagagtgggcggttcaacacatttagaccaagccagtgaattg
tcaaaccgtgctgaatatagactcggaatgagcgacgctagcgactcctcgaaattgaaa
ccactaactgagtcgagatcggaagcgccaccacgcgcgaaacgtgctgcggggtttgtc
gatcctcttagtgatggcggatcactgaaaagaagtaaaaagtccaacggtgcgatgagc
gtcaatccaagccttatggcagagaagaatgctcgaagcactactacagttagcacaaaa
ggccagaagactctgcaaggtttctttaagccggtgtcaagtctcgctgcaaaccgggtg
gcagagaaaacaggcagcgatcccgacgccaacgccgaccggagagctaattccaatgcc
ccgtccccttacttgcagcaaacaatgacgctgcctacagagctcctgtcgcaccatacc
tcatcagctccaagttcacaacgagagaataacgatggcgctgattggtctggcaaatcg
ccaggttcagaatctcaagcgaagcagaatccaagaccaattagccttcagacggaaacc
aatcaaatatttgatccggttcaggcaaaagaatcttggtcaaaacttctcggaagaagg
gtgctcccacgatgcgaacataacgagccctgtatcagccttgtcactaaaaagccaggc
gtcaactgtggaagatcgttctatatttgtgcccggccactaggcccctccggcgaaaaa
gagaaggattctgagtggcgatgcggcacttttatttggagtagtgactggaacggatcg
cagtcgtaa
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