Trichoderma atroviride: 25778172
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Entry
25778172 CDS
T10217
Symbol
TrAtP1_004996
Name
(RefSeq) uncharacterized protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tatv Trichoderma atroviride
Brite
Enzymes [BR:
tatv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
25778172 (TrAtP1_004996)
Transfer RNA biogenesis [BR:
tatv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
25778172 (TrAtP1_004996)
Prokaryotic type
25778172 (TrAtP1_004996)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
25778172
NCBI-ProteinID:
XP_065968626
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All DBs
Position
2:join(6435046..6435200,6435284..6436777,6436838..6437009)
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AA seq
606 aa
AA seq
DB search
MAAGDEAPVAASAPSAERNQDKPMASGEAGQGSGNNRGKKGKKGDRGRGEWSRTKVDKRK
RHDEYKEFKRRKISDIDNPKANPFSKEEIEAESRRPKRKVAVMIGYAGTGYKGMQLNGDE
ETIERDLFQAFVKAGAISKANADDPRKSSLARCARTDKGVHAAGNVISLKLIIEDEDIVD
KINEALPPQIRVWGIQRTNNSYNCYQYCDSRWYEYLMPSYCLLPPHPQSFLGKKLVEVNK
EYGAEEETNARLADVKDWWSEVEEKDIKPILAGLDEETRAAVLESLHSEQAPEENADESK
KAESTQPAVVQEETAKEDGDYVMVDKEQPSSENAEPATTNEGDNATPQRPAVVLETVQPK
RRELGPVDFALRDIKAAYIGAKRAYRVSPERIQRLQEALNQYVGTNNFHNYTVQKSHGDP
SSKRHIRSFVVNPKPIIIGDTEWLSLKVHGQSFMMHQIRKMVGLATLMVRCGTTLDRIKE
SYGPQKMAIPKMPGLGLLLERPVFENYNKRATETLGREDIDFDRYEEKLEAFKQEQIYSR
IFGVEEKENSFHSFFSQIDQFRSNHFLWLTAGGMKVATIDKSNGKLQDVDKQLGDEDEED
PEGGEG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcgacgaggctcctgtcgctgctagcgcgccctcagctgagcgcaaccaa
gacaagccaatggcatcaggcgaggccggccagggctctgggaacaaccgcggcaagaag
ggaaagaagggcgacagaggccgaggagaatggagccgcaccaaggtagataagcggaag
cgccatgacgagtataaagaattcaagcgccgcaagattagcgacatcgacaaccccaag
gcgaaccccttctccaaagaggagattgaggcggagagccgtcggccgaagcgcaaggtt
gccgtcatgattggctacgctggaactggatacaagggcatgcagctcaacggcgacgag
gagacgattgagcgggatctgttccaggcctttgtcaaggccggcgccatttcaaaggcc
aatgccgacgaccctcgcaagtcgagcttggctcgctgcgcgcggacggacaagggcgtg
catgctgcgggcaatgtcatcagcttgaagctgattatcgaagacgaagacattgtcgac
aagatcaacgaggctcttccgccgcagatccgagtctggggtattcagagaaccaacaac
agctacaactgctaccagtactgtgattcgagatggtacgagtatctcatgccgagctac
tgtcttctgcctccgcaccctcaaagcttccttggcaagaagctggttgaagtcaacaag
gagtacggcgctgaggaagagaccaacgcaaggctggctgatgtcaaggattggtggtcg
gaagtggaggagaaggatatcaaacctatcctggccggactggacgaagagacaagggcc
gccgttttggagagcctacattccgaacaagcccccgaagaaaatgcagatgaatccaaa
aaggctgagagcacacaaccagctgttgttcaagaggagacggcaaaggaagatggggac
tatgtcatggttgacaaggagcagccgtcatcagaaaatgccgaacccgccaccacaaat
gaaggcgacaatgctactccccaaaggcctgcagtcgtcctcgagacggttcagcccaag
cgccgcgagttgggtcccgtggactttgccctgcgcgacatcaaggcagcgtacattggc
gctaagcgtgcctatcgcgtgtctcccgagcgcatccagaggctgcaggaagccctcaac
cagtacgtgggaaccaacaacttccacaactacaccgtgcaaaagtcgcacggcgacccg
tcatcaaagcgccatatccggtcctttgtcgtcaacccgaagcccatcatcatcggcgat
accgagtggctgtccctcaaggtccatggacagagcttcatgatgcaccagatccgaaag
atggtcggcctggcgacgctgatggtgcgctgcggcacaacgctggaccgcatcaaggag
agctatggcccgcagaagatggctattcccaagatgcccggcctgggtctgctgctggag
cggcctgtgtttgaaaactacaataagagagcaacggagacgctggggcgggaggatatc
gactttgacaggtatgaggagaagctggaggcgtttaagcaggagcagatttactcgcgc
atctttggagtcgaggagaaggagaattcattccacagcttcttttcacagattgaccag
ttcaggtcaaatcacttcctgtggctcaccgccggaggcatgaaggtcgcgacgattgac
aagtcgaatggaaagctgcaggacgtcgataagcagcttggtgatgaggacgaagaggat
cccgaaggcggagagggctaa
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