Trichoderma atroviride: 25778435
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Entry
25778435 CDS
T10217
Symbol
TrAtP1_010453
Name
(RefSeq) uncharacterized protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
tatv Trichoderma atroviride
Pathway
tatv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
25778435 (TrAtP1_010453)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tatv04121
]
25778435 (TrAtP1_010453)
03036 Chromosome and associated proteins [BR:
tatv03036
]
25778435 (TrAtP1_010453)
Ubiquitin system [BR:
tatv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
25778435 (TrAtP1_010453)
Chromosome and associated proteins [BR:
tatv03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
25778435 (TrAtP1_010453)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_C
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_SCAP
F-box-like
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
F-box
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
MgtE_N
Beta-prop_NWD2_C
Beta-prop_DCAF4
Beta-prop_VPS8
F-box_4
Motif
Other DBs
NCBI-GeneID:
25778435
NCBI-ProteinID:
XP_013945184
UniProt:
G9NQW6
LinkDB
All DBs
Position
5:complement(join(3651745..3654611,3654673..3654871))
Genome browser
AA seq
1021 aa
AA seq
DB search
MSRPDNLTPSMGPFSPAHQPDEGYSEDPLGPGLTEQISSLASLKSPMELPQWMAANASQL
PVSVKSKLAMALLDQLPTSAIVEIVERLSPRLYIDFIRHLPAEICLKILGYLDPVSLVSV
LQTCRAWYDLAVDRKLWERLYYLEGWKAVQAEIDAWEIRVNTGVSNSIGHLHRMQTSDDH
PTKIRAILNHDEDEDHDLEMLDRDRLPSIQESSAGASLFGSLGTLQSFKQTLPSLGDMHL
DSFSSAKGKAVDRSYGSSSSSSESRAKRKEPGGTPEISLPVMAAGDTTASMIKSTLWTWD
INSSRYRINWKYLYNMRRRLESNWELGKFKTFVLPHPDFPEEGHQECVYTLQFDANYLVS
GSRDRTMRIWNLHTRRLVRPPLAGHHGSVLCLQFDADPAEDILVSGSSDSNIFIWRFSTG
ELVQKITNAHRESVLNVRFDKNVLVTSSKDKTIKIFNRRPLKYGDLGYGPVDAAVNPVGI
SVKPYGYELDLSQELPIKPAYTVIGKLEGHGAAVNAIQIRGRTIVSVSGDRHIKVWNWPE
QVCTQTIPAHEKGIACVEFDERRIVSGSSDYEVCIFDALTGLKVASLRGHAHLVRTVQAG
FGDLPYSKQEDEAEAKRVDAEYFRAVEAGEIDHEGDRRIRRSRRVNAGSSRPADLQATGA
KVPPGGGGGRKYGRIVSGSYDQSIIIWRRDKEGVWKPGHHLRQEEAAEAAHRQVALTNVQ
RQSTQFASAAIAVSAVSPGAPQGMQSSPILDPNSENSQSARLYMAMIDQTVPFGVAALRQ
ALASHPSMLIYFGYLQAAIEREPSPFVRAHLRQAVADGLIAIQNNQMARQRLISRGNSHI
PGPTATTDARALNLAPPYAGGSMAGPSTGAFVAGDGIGGGSNNNNTAGGNSEYRQLAYSP
AMVSQVPAPTPLHAPVPQPSQLSVTPGQGPPPQLPPMVQQPEIPGQVHGQQGPTEVENNP
QPPESRPRIAAAENPPARVFKLQFDARKIICCSQAPVIVGWDFCNGDPELEEVARFFAAV
D
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgaccggacaacctgacgccctccatgggcccgttttcgcccgcccaccagccc
gacgagggctactctgaggatcctctgggcccggggctgactgagcagatctcgtcgctg
gcctcgctcaagtcgcccatggagctgccgcagtggatggccgcaaatgcttcgcagctg
cccgtgtcagtcaaatcaaaactggccatggccctcttggaccagctcccaacctccgcc
atcgtcgagatcgtcgagcgtctcagcccgagactgtacatcgacttcatccgacatctc
cccgccgaaatctgcctcaagatcctgggctatctcgatcccgtctctctcgtcagcgtg
ctgcagacgtgccgtgcctggtatgacctggccgtggaccgcaagctatgggagcggctg
tactatctcgaaggctggaaggccgtgcaggccgagatcgatgcgtgggagattcgggtc
aacaccggcgtgagcaattccatcggccacctgcaccgcatgcagacgtcagacgaccac
ccaaccaagattcgagccatcctcaaccacgacgaagatgaggaccacgatttggaaatg
ctggaccgcgataggctgcccagcatccaggagagcagcgctggggctagcctctttgga
tctctcggtacgctgcagtctttcaagcagactctcccctccttgggagatatgcatctc
gatagcttctcgtccgccaaaggtaaggctgtagaccggagctatggatcgtcgtcgtcg
tcgtcggaaagcagggccaagcgcaaagagcccggcggcacccccgagatctcgctgcct
gtaatggcggccggcgacaccaccgcgagcatgatcaagtcaaccctgtggacgtgggat
atcaacagctcccgctatcgcatcaactggaagtatctctataacatgaggcgacgactt
gaatcgaactgggagctgggcaaattcaagacttttgtactgcctcaccccgactttccc
gaagaaggccatcaggagtgcgtctacactctgcagtttgacgcaaactatctcgtcagc
ggcagccgagatcgcacaatgagaatctggaacttacacacccgccgcctagttcgtcca
ccgctcgcaggccaccacggttcggtcttgtgccttcagttcgacgcagacccggccgag
gacatcttggtctccggtagcagtgactctaacatcttcatctggcgcttttccaccgga
gagcttgtgcaaaagattaccaatgcgcatcgtgaatctgtgcttaacgtgcgattcgac
aaaaatgttctcgtcacatcttccaaagacaagaccatcaagattttcaaccgtcgccct
ctcaagtacggcgatctgggctatggccctgtggatgcagccgttaacccggtgggcatc
agcgtcaagccctatggttacgagctcgatctgtcccaggagcttcccatcaaacccgcc
tacacggtgattggcaagctggaggggcacggtgccgccgtcaacgccattcagatccgg
ggccgcactattgtttccgtctctggcgatcgccacatcaaggtatggaactggccagag
caggtttgcacacaaaccattccggcgcatgaaaagggcattgcctgcgtcgagtttgac
gaacgccggattgtgagcggtagtagtgactacgaagtctgcattttcgacgcgctgacc
ggcctgaaagtggcctcccttcgcggacacgcccatctggtgcgaaccgtccaggccggc
tttggcgacttgccctacagcaagcaggaagacgaggccgaggcgaagagagtggacgcc
gaatactttagagctgtagaagcgggagagattgaccacgagggtgaccggagaatccgt
cgctctaggcgagtgaatgcgggaagctctcggccggctgatctccaggctactggcgcc
aaagttccgcctggcggaggaggcggacgcaagtacgggcgaatcgtttcgggctcgtat
gaccaaagcatcatcatctggcggcgggataaggagggcgtgtggaagcccggacatcat
cttcgccaggaagaagctgccgaggcggcgcatagacaagtcgccctgaccaacgttcag
cgacagagcactcagtttgcctcggcggccattgccgtgtcggcggtgagtcctggcgcg
ccgcagggcatgcaatcctcgcctatactggatccaaacagcgagaacagccagtcagca
cggctttacatggccatgattgaccagacggtcccctttggggttgcagcgctgagacag
gcgctggcaagccacccatccatgctcatctattttggctacctacaagccgcgattgag
cgagagccttctccctttgtgcgggcacatctccgacaggcggtggcggacggcttaatc
gcgatacagaacaaccagatggccagacagcggctcatttctcgcggcaactcccacata
ccaggccctaccgctaccacagatgcaagagccctcaacctggctcctccatatgctggc
ggatcgatggcgggcccgtctaccggcgcctttgtagcaggtgatggcattggtggcggt
agcaacaataataacaccgctggtggcaacagtgaatatagacagctggcatattcacca
gcaatggtgtcacaagtcccagctcctacgccgctccatgcaccggtgccccaaccgtct
caactttccgtgactcccggccagggacctccgccccaactccctcccatggtccaacag
cctgagattcctgggcaagtccatgggcagcaaggaccgactgaagtcgaaaacaacccg
cagcctcctgagtcacgcccacgcattgcggcggcggagaaccccccagcgcgcgttttc
aagcttcagttcgatgcccgcaagatcatatgctgtagccaggctccagtcattgtaggt
tgggacttttgcaatggggatcctgagttggaagaggtggctcgcttctttgcggcggtt
gattga
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