Trichoderma atroviride: 25778642
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Entry
25778642 CDS
T10217
Symbol
TrAtP1_004710
Name
(RefSeq) uncharacterized protein
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tatv Trichoderma atroviride
Pathway
tatv03440
Homologous recombination
tatv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
25778642 (TrAtP1_004710)
03460 Fanconi anemia pathway
25778642 (TrAtP1_004710)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tatv03032
]
25778642 (TrAtP1_004710)
03400 DNA repair and recombination proteins [BR:
tatv03400
]
25778642 (TrAtP1_004710)
Enzymes [BR:
tatv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
25778642 (TrAtP1_004710)
DNA replication proteins [BR:
tatv03032
]
Eukaryotic type
DNA Topoisomerases
25778642 (TrAtP1_004710)
DNA repair and recombination proteins [BR:
tatv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
25778642 (TrAtP1_004710)
FA (Fanconi anemia) pathway
25778642 (TrAtP1_004710)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-GeneID:
25778642
NCBI-ProteinID:
XP_065968506
LinkDB
All DBs
Position
2:join(5668236..5668391,5668480..5668677,5668735..5668913,5668978..5669147,5669219..5670549,5670626..5670667)
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AA seq
691 aa
AA seq
DB search
MRFTQLRPASPSLALFNDSHPGPGDMRVLCVAEKPSISKAVAGHLSGGSFATHNTRNKYI
KNYSFDFDFGQQWGSSSVTMTCVTGHLTNVEFTNEYKNWSHPPPESLFTAPIVKNVHDDK
KDIAKNIADQAKYARLLVIWTDCDREGEHIGQEIVDAAKVGNAAIQVKRARFSNVERAHV
LTAARRLIELDEKQVNAVSARIELDLRIGYAFTRFITNNLKHLGGPLAELVLSYGSCQFP
TLGFVVDRYFRVKNFVPEPFWGISLTHNKDGKQVRFSWARNRLFDRMTAVLLYERCLDAK
KAKVTKVQEKPTRKFKPLPLTTVELQKAATRLLRMSGQQAMTIAEGLYNKGFISYPRTET
DRFDKGMNLRALVQKQTTDQRWGPFAQGLVNGGFQQPREGRHDDKAHPPIHPIAHVAPSV
LSHDEGRLYEYVTRRFLACCSEDAKGMATDIELQLGDEYFSTRGVIVLERNYLDVYVYEN
WNNSTELPKFTVGEQFEPTEAMMTEGKTSPPNYLTEADLIALMDANGIGTDATMAEHIQK
IQDREYVATITRGNDTAGGAGGGDDEEEANGAPAARGGGRGRGRGGRGRGGGASARGGRA
SGLKVFVPTQLGVALILGFDRMSFEMSLGKPFLRKEMELQMKAICEGSTTRRAVLEQSIA
QYKQVFLQSQEQVGVLKQACREFVFGQRPGA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagattcacccagcttcgcccagcctcgcccagcctcgcccttttcaacgattcgcat
cctgggcctggagatatgagagtcctatgcgtggccgagaagccgtccatctccaaggct
gtggccggccatctctctggaggatcctttgcaacacataatacacgcaacaagtacatc
aaaaattactcgtttgactttgactttggccagcaatggggaagctcatccgtcaccatg
acctgtgtcacaggccatctcaccaatgtcgagttcaccaacgagtacaagaactggagc
catccgccaccggaatcactcttcactgcacccattgtgaagaatgtccatgatgacaaa
aaagatattgccaaaaatatagcagatcaggccaaatatgctcgtctgctggtgatatgg
accgattgtgatcgagagggagaacacattggacaggagattgtcgacgcagcaaaggtg
ggcaacgctgcgatccaagtgaagcgtgccagattcagcaatgtggaacgagcacatgtg
ttgacggctgctagacgtctgatcgaattggacgagaaacaggtcaatgccgtttcagca
agaatagagctggatcttcgcattggatacgcgtttacgcgttttataacgaataatctc
aagcatctaggcggacctctggcagagctggttctgagctatggatcatgccaatttcca
actctgggattcgtggtggaccggtattttcgcgtcaagaactttgtccctgagccgttc
tggggcatctcgttgacacataataaagacggcaagcaagttcgcttttcctgggccagg
aaccgtctctttgaccgtatgacggccgtactgttatacgagagatgtcttgacgcaaaa
aaggccaaagtcaccaaagttcaggaaaagccaacacgaaaattcaagccgttacctctc
accactgttgagctccaaaaggcagccactcgtttgcttcgaatgtctggtcagcaagcc
atgacgatagcagaaggcctctacaacaagggattcatcagctacccgagaacagaaacc
gatcgtttcgacaagggcatgaatttgagggctctagttcaaaaacagactacggatcag
cgctggggtcctttcgcccagggactcgtcaatggcggcttccaacaaccaagagagggg
aggcacgacgacaaggcccatccacctatccatcccattgcgcatgtagcaccatctgta
ttgagccacgacgaaggacgcctatatgagtatgtaacgcgccgattcctcgcatgctgc
tccgaagatgccaagggcatggcaaccgatattgaactccagcttggagacgagtatttc
agcacacgaggcgtcattgtactcgaaagaaactacttggacgtctacgtatacgaaaac
tggaacaactccacagagcttcccaaattcacagtcggagagcaattcgagccgacagaa
gcaatgatgacagaaggcaagacgtcaccgccaaactacctcaccgaagcagacctcatc
gcgctcatggacgccaacggcatcggaaccgacgccaccatggcagagcacatccaaaag
atccaggaccgcgaatacgtagcgacaataacgaggggaaacgacacagccggaggagca
ggaggaggagacgacgaggaagaagcaaacggagccccggctgcacgaggcgggggccgc
ggtcgtggaagaggaggccgaggccgaggaggcggcgcctcagcaagagggggacgagca
agtgggctcaaggtgtttgtgccgactcagcttggcgtagcccttatcctaggcttcgac
cggatgagcttcgaaatgagccttggcaagccctttctgcgcaaggagatggagctccag
atgaaggccatttgcgaggggagcacgacgcgccgagcggttctcgagcagagcattgcg
cagtacaaacaggtattcttgcagtcgcaggaacaagtgggagtccttaagcaggcttgc
cgcgagtttgtctttggccagagaccaggagcatag
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