Trichoderma atroviride: 25778687
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Entry
25778687 CDS
T10217
Symbol
TrAtP1_006150
Name
(RefSeq) uncharacterized protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
tatv Trichoderma atroviride
Pathway
tatv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
25778687 (TrAtP1_006150)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tatv03400
]
25778687 (TrAtP1_006150)
DNA repair and recombination proteins [BR:
tatv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
25778687 (TrAtP1_006150)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_21
AAA_27
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
25778687
NCBI-ProteinID:
XP_065969087
LinkDB
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Position
3:join(2777775..2778146,2778205..2778367,2778427..2780837,2780905..2781579)
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AA seq
1206 aa
AA seq
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MPGDKAASAARTPAKATRPAAAASATKQKSIMSFFQKSSPVSSSPATREQVSSDILYSSP
LKETKANSLPKTKFFAELSTPVPSSDALEPTSSQENMESTVKRSKVKFAEAPESSVAPSS
PIRKGKRAVNYAESSDEDDEPFAYGAASQTRRRGRVTRNVVNDEDDYGGSDTAEQEDEDD
IDDFVVSDDSDGEASRPKKRKRPSKPQSARKRTNVSSPIQEDTEDYLAALGDIDMEDEDM
PTESTAKQWSYDPESTEKQPVVRPIDRVSTKDPKVKEKAYMKEPGERYPWLATIRDKDKR
LPDDPDYDPRTLFIPPGAWNKFSPFEKQYWEIKQNLWDTIVFFKKGKFYELYEKDATIGH
QEFDFKMTDRVNMRMVGVPEGSLDHWVNQFIAKQYKVARVEQMETNLGKEMREREDKSGK
KADKVISRKLGCVLTAGTLVDGSMLQDDMAAYCVSIKESIVDDLPAFGIAFTDTATGRFF
LSGFVDDVDRTKFETLIAQIGPRELLLEKSGLATKTLRILKNNTSPTTIWTNLKPGTEFW
DADTSRKELSCAKYFVKGEDEEEVWPEALQELRDDDLVMSAVGGLTSYLRFLKLEGPLLS
QGSFEIYKPIQKNSTLVLDGQTLTNLELFSNTVNGNTDGTLFGLLNKCITPFGKRLFRQW
VAHPLCNIDRINERLDAVELLNDDPSVREQFASQLVKMPDLERLISRIHAGACKPEDFVR
VLEGFEQIEYTMTLAAAFKGGNGLIDRLISSMPNLEEPLAYWSTAFNRQRVKEEKLMIPE
SGIDEDFDASAARIQEIKDQLNDLLIEKKGELKCKTLKYTDVGKEIYQIEAPKAAKIPSS
WRQMSATKDVKRWYFPQLTALVRELQEAEETHSQLIREIASRFCRKFDADYETWLKSIQI
VAQLDCLVSLAKASSSLGEPSCRPQFVEEERSVMDFEELRHPCMINTVDDFIPNNIKLGG
DQAKINLLTGANAAGKSTVLRMTCIAVIMAQVGCFVPAKSARLTPVDRIMSRLGANDNIF
AAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVATHIGCIGF
FATHYHSLATEFENHPEIRARRMQIHVDDEERRITFLYKLEDGVAEGSFGMHCAAMCGIS
DRVIKRAEVAAKEWEHTSRLKDSLDKAKTGCYIPLGILSDIGSLLGNKGDVGVEGVDVLL
KAIESL
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgccaggtgacaaggcagcgagcgctgctcgcacgccagcaaaggccacccggccagct
gccgcagcctctgcgaccaagcagaaatcgataatgtcgttcttccagaagtcttcgccc
gtttcgagctcgcccgcaactcgcgaacaggtctcgtccgacatcctatactcctcccct
ctgaaagagaccaaagccaactcgctgccaaagacaaagttctttgccgagctctccact
ccggtgccttctagcgatgccctggagcccaccagctcgcaagagaatatggaatcgacc
gtcaagcggtccaaagtcaagtttgccgaagcgccggagagctcagtagcccccagcagc
ccaattcgaaaggggaaaagggctgtcaattatgccgagtcctcagatgaagatgatgag
ccttttgcctatggagcggcttcacaaactcggaggcgtggtagagtcacacgcaacgtt
gtcaatgacgaagacgactacggtggaagcgataccgccgagcaagaggatgaagatgac
attgacgactttgttgtatccgacgattcagacggagaggcctctcggccgaagaaaagg
aagcgtccgtcaaaacctcaatcagcacgcaagcgcacaaacgtctcgtctcctatccag
gaggacacagaagactatctcgcagctcttggcgatatagacatggaggatgaagatatg
cctaccgagtctacggccaagcaatggtcttatgatccagaatctactgaaaagcagcct
gtcgtaaggccaattgaccgtgtcagcacaaaagaccccaaggtgaaggagaaagcatat
atgaaggagcccggcgagcggtatccctggctggcgaccatcagagacaaagataagcgc
ttgcctgatgaccctgactatgatccgcgaactctcttcatccctccaggtgcgtggaat
aagttttcaccatttgagaaacagtactgggagatcaagcaaaatctctgggacaccatc
gtctttttcaaaaagggcaagttctatgaactctatgaaaaagatgcaaccattggtcac
caagaattcgacttcaagatgaccgatagagtcaacatgcgcatggttggcgtcccagag
ggttctttggaccactgggtcaaccaattcattgccaaacaatacaaagttgctcgtgtt
gagcagatggagaccaatcttggcaaagagatgcgagaacgggaagacaagagtggtaaa
aaagcggataaggtcatctctcgaaagctaggatgtgttttaactgccggtaccttggtt
gatggcagcatgctccaggacgacatggctgcgtattgtgtctctatcaaagaatctatt
gtggatgatttgccagcgtttggtattgcctttacggatactgcaactggtcgattcttc
ctctctgggtttgtcgatgatgtcgatcggaccaaattcgagactctcattgctcaaatt
ggcccccgagaacttttgctggaaaagtctggactagcaacaaaaactcttcgcatcctc
aaaaacaacacctcccctaccactatttggacgaatctaaaacccggaacagagttttgg
gatgcggacacttctcgaaaagaattgtcctgcgccaaatactttgtcaaaggagaagat
gaggaagaagtatggccggaagcgctccaggaactcagagatgatgatcttgtcatgtct
gctgttggcggtctgacttcgtatctccgattcctcaaactagaaggtcccttgttatca
caaggaagtttcgaaatctacaagcctatccagaaaaacagcactcttgttttggatggc
cagacattgacaaaccttgaactgttttccaacactgttaatggcaataccgatggcacg
ctgtttggtctgctcaataagtgcataactccgtttggcaagcgtctattccgccagtgg
gttgcccatccactgtgtaatatcgatcgtatcaacgagcgcttagatgctgttgagctg
ctgaatgatgatccttccgtccgcgagcagtttgcttcgcagctggtcaagatgcctgac
cttgagcgtctgatttcacgcatccatgctggtgcttgcaagccagaagattttgttcgt
gttcttgaaggtttcgagcaaattgagtatacgatgactcttgctgctgccttcaaaggt
ggaaatggcttgatcgacaggctcatttcatccatgcccaacttggaagaaccgctggcg
tactggagcacggcatttaaccgacagagggttaaagaagagaagctgatgatcccagag
agcggtatcgatgaagattttgacgctagcgcggctcgaatccaggagatcaaagaccag
ctaaacgatctattaatagagaagaagggggagctcaagtgcaaaacgctcaaatataca
gatgttggaaaggaaatctaccagatagaagccccgaaagctgccaagattccttccagc
tggcgtcaaatgtctgcaacaaaggacgtcaagcgatggtattttcctcaactcactgcg
ttggttcgagagctgcaagaagccgaggaaacccactcccagctgattcgagaaattgcg
tcacgcttctgccggaaattcgatgctgactacgagacttggctcaagtcaattcaaatt
gtcgcccagcttgactgtcttgtgagtcttgccaaggcatcgtcttcactcggagagcca
agctgcagacctcagttcgtcgaggaagagcgtagcgtgatggactttgaggaactgaga
catccttgcatgattaacaccgtggacgactttattccgaataacatcaagctcggcggt
gaccaggccaagattaaccttcttactggtgccaacgcggctggtaagtctacggttctc
agaatgacttgcattgccgttatcatggctcaagttggctgttttgtcccggccaagtcg
gctcgtctcactcctgttgatcgaatcatgtctcgcctgggagccaacgacaatattttt
gccgcgcaatccaccttcttcgtggagctctctgaaaccaaaaagattctctccgaggcc
acgccccgctccctcgtgattcttgatgagcttggccgaggaacgagctcatacgatggt
gtagctgtcgcgcaagctgtgctgcatcatgtggcgactcatatcggctgtatcggtttc
ttcgcaacacactaccactctcttgctactgaatttgagaatcacccagagattcgtgct
cgtcgcatgcaaattcatgttgatgacgaagagcgtagaatcacgttcttgtataagctc
gaagacggggttgcagagggtagtttcggtatgcattgtgccgccatgtgtggcatctca
gaccgcgtcattaagagagctgaagtggcagccaaggaatgggaacataccagccgacta
aaagacagcttggacaaggccaagacaggatgctacattcccttgggcattctcagcgat
atcggttccttgctagggaacaagggcgacgttggggtggagggagtagacgttttgctc
aaagccattgaaagcttgtaa
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