Trichoderma atroviride: 25778699
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Entry
25778699 CDS
T10217
Symbol
TrAtP1_006372
Name
(RefSeq) uncharacterized protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
tatv Trichoderma atroviride
Pathway
tatv03440
Homologous recombination
tatv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
25778699 (TrAtP1_006372)
03450 Non-homologous end-joining
25778699 (TrAtP1_006372)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tatv03032
]
25778699 (TrAtP1_006372)
03400 DNA repair and recombination proteins [BR:
tatv03400
]
25778699 (TrAtP1_006372)
DNA replication proteins [BR:
tatv03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
25778699 (TrAtP1_006372)
DNA repair and recombination proteins [BR:
tatv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
25778699 (TrAtP1_006372)
BRCA1-C complex
25778699 (TrAtP1_006372)
NHEJ (non-homologous end-joining)
MRX complex
25778699 (TrAtP1_006372)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
COG6_N
DUF948
Motif
Other DBs
NCBI-GeneID:
25778699
NCBI-ProteinID:
XP_013938452
UniProt:
G9P9H0
LinkDB
All DBs
Position
3:complement(3368027..3371659)
Genome browser
AA seq
1210 aa
AA seq
DB search
MQLTAKKNTRSLKTLDCSLVVVNNGERTTTSTRTAQLDEMIPERLGVSRAVLDAVIFCHQ
DESLWPLSEPSALKKRFDEIFEAQKYTKAIENLKVLRKKQVEQLSMLQNDEAHNKANKDR
GERAEKRMSGLQTEIESARDQCEALTVEMQETQVRIKQKHEQANSFLQIVQNLSNKREQL
EYRQDAINELKQTIDELPETDDALERALSQYEESMGRYQEEAEQNKAQYAELQQELTNHR
QSQSAKLAEQGKLQSDKEKYERQLKARVQLVQEAASQYNFRGFDEDVSDQHIQVFQDKIQ
KLLTEKRRELERLQKENAAELDKATGVITELEGRKAARTQDRVSAKQRMGAIEKRTSVLQ
NEAGNIDVDEGAKAILDGQLDELESRFKHAQQELEKSNWDQQLTEANDKQWQLDNENEKL
GRELVECTRLASERAQLELRKKEMSDRKRKLDTLIETWKPKLSNTLGDDWEPHTLESRFQ
SIQSRQSKAVQEAQKRRDQTRQKQQKVEYRLKTAKETHGKKTQEMNQMKQKVVAALQNVR
DNAVVEDYVDEVAAVEQQVEELRTDLSLFDALFDYYNKCKRMLDTQKKCRLCDRHFDDGQ
SAALDRLSKKIDKHLDPKGKVDTEKDLKEAVDNLEALRAVRSAFDTYERLSAELPALQDE
WKTAENEFETLEKELEDEDALVAAAEEKLRDLGDLSKTVANISQTVREIKDAETQVDRIV
SQQSSGGVTRSVEEIHELQSSISEQIRTLKNKITKLTADRQRMKDQVNSLELEKSELRNK
IGRAAGQLEKKKDLQNQIQSLKEDYTHQREVIQRTDEELEKLEPSITEARSARDETLRHG
RSKEQVITDERDAITSSIAEIKKMDNDIQDYVDRGGMTNLSSNQRALASLDTAISTTEKE
IADLTVRTNKLKQDIDSGDRKRKNFNDNLNYRKHLRTLDVLRKDIEDLEDRNAHEDYERL
EAEARSLENTANRLLAERGSVMGTMKSKDEELGRLLQEWDMDFKDAKHKYRESHIRVETT
KAAIQDLTQCGSAVDKAVMQYHSMKMEDVNRIASELWQTTYQGTDIDTILIRSDNETANN
KRNYNYRLCMVKQDTEMDMRGRCSAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLD
RDNIKSLAESLHRIIKTRQQQSNFQLIVITHDEEFLRHMRCSDFCDSFFRVKRDEKQNSV
ISRESITKIF
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcactgccaagaagaacacccgatcgctaaagacgcttgactgctcgctggtg
gtcgtgaacaatggggagcggacgacaacatcaaccagaacagcacagcttgacgaaatg
attcccgaacgactcggcgtttctcgcgctgtcctcgatgctgtcatattctgccaccaa
gatgaatcgctttggccattaagcgagccttcagccttgaagaagcgcttcgacgagatt
ttcgaggcccaaaaatacacaaaggcaatcgagaacctaaaggtgcttcggaaaaaacag
gtggagcagctttcgatgctgcagaacgacgaggcccacaacaaggccaacaaagataga
ggcgaacgggctgagaagcgtatgagtgggctccaaactgagattgaatcggctcgcgac
cagtgcgaagctcttaccgtcgagatgcaggaaacacaggttagaataaaacagaagcat
gaacaggccaacagcttcctccagatcgtgcaaaatctcagcaacaagcgggagcagctt
gaataccgtcaagatgccattaatgagctcaaacagacaattgatgaattgcctgaaact
gatgatgcactggagcgcgctctatcccagtacgaggaaagtatggggcgctaccaggaa
gaggctgagcagaataaggcacagtacgccgagctccaacaagaactgacgaaccaccgc
caaagtcaatcagcaaagttggccgaacagggaaaactacagtctgacaaggagaaatat
gaacgacagctaaaagcgcgagtgcagttggtccaggaggctgcgagccaatacaacttt
agagggtttgatgaagacgtaagcgatcagcatatacaagttttccaagacaaaattcaa
aagctcttgactgaaaagaggcgagaattggaacgactacaaaaggagaacgccgcggag
ctagataaggctacaggtgtgattactgagcttgaggggcgcaaagcggccaggactcaa
gatcgcgtctctgccaaacagcgcatgggggctatagaaaagcgtacaagcgtccttcag
aatgaagctgggaacattgacgttgatgagggagccaaggctattcttgacggacagctt
gatgagctggaatccagattcaagcatgctcagcaagaactggaaaagtccaactgggac
caacagctgactgaagccaatgataagcagtggcagctggacaacgaaaatgagaagctt
ggtcgcgagctcgttgagtgcacgcgactggcgtcggagcgcgcacagctagagctgagg
aagaaggagatgtcagatcggaaacgaaaacttgacactctgatagagacgtggaagccc
aagcttagtaacaccctcggagacgactgggagccgcatactctggaatctcgattccaa
tcgattcaaagccgccaaagcaaagccgtacaagaggcgcaaaagcgtcgggatcagacg
aggcagaaacagcaaaaagtagagtacaggctaaaaactgccaaagagacgcacggtaag
aagacgcaagagatgaatcaaatgaagcaaaaagttgttgctgcgctgcaaaacgtacgc
gacaatgcggtggtagaagactatgtggacgaagttgctgctgtggaacaacaggttgaa
gagctccggaccgatctcagcctttttgatgccctatttgactattacaataagtgcaag
cgcatgttggatacccagaagaaatgcaggctgtgcgatcgtcattttgacgatggccaa
agcgcagctcttgaccgcctgagcaagaagatcgataagcacttggatccaaaaggcaaa
gtcgatactgaaaaggacttgaaagaggctgtggataatctggaagcgctgcgtgcggtg
cgatcagcatttgatacgtatgagcggctttcagcagagctgcccgctctccaagacgaa
tggaaaactgctgaaaatgaattcgaaacgctagaaaaagaactcgaagatgaagacgct
ttggttgctgcagcagaggagaagttaagagacctcggagatttgtctaaaacggttgca
aacatttcccaaactgttagagaaatcaaagacgctgagacccaggtggaccgcatcgtg
tcccagcaatcgtccggcggggtgactcgcagcgtggaagagattcatgagcttcagtca
agcatatccgagcagatcagaactctgaagaataaaattaccaagctcacagccgatagg
cagcggatgaaagaccaagtcaactcacttgaacttgagaagagtgagctgcggaacaag
attggtcgcgccgcaggacagcttgagaagaaaaaggaccttcagaaccagatacagtca
ctcaaggaagactacacccaccagcgcgaagtgatccagaggaccgacgaggaattggaa
aaattggagcccagcattacagaggcacggtcagctcgcgatgagacactacgccatggt
cgatcaaaagaacaggtcattactgacgagcgagatgccattaccagttccatcgccgag
atcaagaagatggacaatgatatccaagactatgttgatcgcggtggcatgaccaacctc
tcatctaaccagcgtgccctcgcctctctcgacacagctatcagcactacagagaaggag
atcgccgatcttacagtacggaccaataaactcaagcaggacattgatagcggagatcgg
aaaaggaagaattttaatgataatctgaattatcgcaaacacttgcggactctcgacgtt
ctgcgcaaagacattgaggacctcgaagaccgaaatgctcacgaagactacgaaaggctt
gaggcagaggcccgttctctggagaacacagccaaccggctgttagcagagcgtggatct
gtcatgggcacaatgaagtcgaaggatgaagagctcggccgcctcctacaagagtgggac
atggacttcaaggacgccaagcacaagtaccgtgaatcccatatccgcgtggaaactaca
aaggcggcgatccaagacctgacccaatgcggctctgctgtcgacaaggcggtgatgcag
taccattccatgaaaatggaagacgtcaatcgcatcgcgagcgagctatggcagacaacg
taccagggcaccgacattgacaccatccttatccgctcagacaacgaaacagccaacaat
aaacgcaactataactaccgcctgtgcatggtcaaacaggacaccgagatggacatgcgg
ggccgctgctcggcaggccagaaagtccttgccagcatcatcatccgcctggccctggcg
gagtcgtttggcgtcaactgcgggctcattgcgctggacgagccgacgaccaacctggac
agggacaacatcaagtctctggcggagagtctgcaccgcatcatcaagacgaggcagcag
cagagcaactttcagctcattgtgattacgcacgacgaggaatttttaagacatatgcgg
tgcagcgacttttgcgatagctttttcagggtgaagagggatgagaagcagaatagtgtg
atttcaagggagagcattaccaagatcttttag
DBGET
integrated database retrieval system
