Trichoderma atroviride: 25779130
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Entry
25779130 CDS
T10217
Symbol
TrAtP1_000933
Name
(RefSeq) uncharacterized protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
tatv Trichoderma atroviride
Pathway
tatv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
25779130 (TrAtP1_000933)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatv03019
]
25779130 (TrAtP1_000933)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
25779130 (TrAtP1_000933)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
HBS1_N
GTP_EFTU_D2
GTP_EFTU_D3
GTP-eEF1A_C
MMR_HSR1
Roc
Ras
Septin
Motif
Other DBs
NCBI-GeneID:
25779130
NCBI-ProteinID:
XP_065966859
LinkDB
All DBs
Position
1:join(2518587..2519640,2519693..2519893,2519961..2521168)
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AA seq
820 aa
AA seq
DB search
MAPPTTYDDDDFVDQYDDIEEEDEMSAEDKVAMQQGTAEVQKALGTEASKVTVAQIQEAL
WHYYYDIDKSVTYLTKTFIAPAPKAAPKPAPKKAPEGKTGAFPLPTNQALFLRTFEANRE
SPEHDAYAANFYGTPIHTLMFPIMEKPRISPAFFDDMPWLEIPKAREAVFIEPPRSVGGL
LGGSSSAPKMSKLQALAALRKKKAEEKKDQERTTPPEDEVSKLSISDSRNKENTGLGSKL
KHDSAVASDAPAQEGEIPKGVVGNSVGGHADSPAINESESSVNTKPEEEPVVSHSHAPSA
FARTLFGSALEADQTQRRHVFAMPYTQSSSFLANAFSEPSPDDIVLAAQAKAGKKTPATP
KTTKKSQKNEEAAKEGGLASSVSSLKINDGPPPNSKGLDVIKEFEQNASKRNASFVVVGH
VDAGKSTLMGRLLLELKLVEERTVDKYRRQGEKIGKQSFALAWVMDQRSEERDRGVTIDI
ATNHFETESTKFTILDAPGHRDFVPNMIAGASQADFAILVIDANTGAYEKGLKGQTREHV
LLLRSLGVQQLIVAVNKLDMVGWSQDRFQEILEEVSGFLTGLGFQDKHVTFIPISGLNGD
NIVKRTEDAAGLWYKGPTLIEGLEASGPSTARALKKPFRMAISEIFRSQQGTTTLAGRID
SGTIQIGDPVLVQPSGESAYIKSIMLDTEAKDWAVAGQNVSVALTNIDPIHIKIGDIICH
TTDPIAVGDTFTMKAMAFEHLMPMPVDLHRGRLHAAGQIQSIAATLDKATGEVVKKKPKV
VQPGGVARILIKLEAKVPLEAGQRVVIRSGGETIAAGLLE
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctccgaccacgtatgacgacgatgacttcgtcgaccagtatgacgacattgag
gaagaggacgaaatgagtgccgaggacaaggttgcgatgcagcaggggaccgcagaagta
cagaaagctcttgggacggaagcaagcaaagtcacagttgcgcaaatacaagaggctcta
tggcattactactacgacatcgataaatctgtcacctacctgacaaagacctttattgcg
ccagctccaaaagcagctcccaaaccagcgccgaagaaggcacctgaaggtaagactggc
gcgtttcccttaccaaccaatcaagccctgtttttgcgaacctttgaagcaaaccgcgaa
tcgcctgagcacgatgcatacgctgcaaacttttacggcactcccattcacacactcatg
tttcccatcatggagaagcctcggatatctccagcgttcttcgacgacatgccatggcta
gagataccgaaagcacgagaagccgtatttattgagccaccacgctctgttggagggctc
ttgggaggcagcagttccgcccctaagatgtccaagctccaagcactggctgcgcttcgc
aagaaaaaggccgaagagaagaaggatcaagaaagaaccactccgccagaagacgaagtg
tcgaagctttcgatttccgatagtcgcaacaaagagaataccggccttggctcgaagctt
aaacacgactcagcagtggcctctgatgcgccggcgcaggagggagagataccaaaaggc
gtcgttggcaattctgtcgggggacacgccgattcgccagccatcaatgaaagcgaatcc
agtgtcaataccaaacctgaagaggagccggtagtgagccatagccatgctccttctgca
ttcgcgcgcacactgttcggctcggctctggaggcggaccaaacgcagaggcgtcatgtt
tttgccatgccatacacccagtcttcctctttcctagccaacgccttctcggagcccagt
ccagacgatattgtgctcgcagctcaggcgaaagcgggaaagaaaactccagccacaccg
aaaaccacgaagaaatcacaaaagaacgaggaagccgccaaagagggcgggcttgcgagc
agcgtctcaagcctcaagattaacgacgggccgccacctaatagcaaaggcctcgacgtt
atcaaggaatttgaacaaaatgctagcaagaggaatgctagtttcgtagtcgttggacac
gtcgatgctggcaagagtacattaatgggccgacttcttctggagctgaagcttgttgag
gagcgcacagtcgacaaataccgccgacaaggtgaaaagattggaaagcaatctttcgcg
ttggcatgggtcatggaccagcgaagtgaagaacgagaccgaggagtgacgatagacatc
gccaccaatcacttcgagaccgagtcaacaaagtttacaattctagatgctccgggccat
cgagactttgtgcccaatatgattgctggcgctagtcaggcagactttgcaatccttgtt
atcgatgccaacactggagcttacgagaagggtttgaaaggccaaacacgagagcatgtt
ctgcttctacggagtttaggtgttcaacagctaatcgttgctgtaaataaactcgacatg
gtcgggtggtcccaggatcgtttccaagaaattttagaggaagtttctgggtttttgact
ggcctcgggtttcaagacaagcatgtcacgtttattcccatatcagggctgaacggagac
aacattgtcaagagaacagaggatgctgctggactctggtataaaggacctactctaata
gagggcttggaagcatctgggccgtcaaccgcacgagctctaaagaaacccttccggatg
gcgatttctgagattttccgctcgcagcagggaactacgactcttgctggccgtatagac
tctggcaccatccaaattggagatcctgtgctagtgcagccaagcggagagtcggcgtac
atcaaatctataatgcttgataccgaggccaaggactgggcggtggctggacagaatgtc
agcgttgctttgacgaacatcgatcccattcatatcaaaatcggcgacatcatctgccac
acaacggatcccatcgctgttggcgatacatttaccatgaaggccatggcatttgagcat
ctgatgccgatgccagtggatcttcaccgcggcagactccacgcagcaggccagattcaa
tccatagcggctactctcgacaaggccactggtgaagtagtcaagaagaagcccaaggtt
gtacagcccggaggtgtggctcggattttgatcaagctggaggcaaaggttcccttggag
gccggacaacgggttgttatacgaagcggaggtgaaaccatagccgctggcttattagag
taa
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