Trichoderma atroviride: 25779138
Help
Entry
25779138 CDS
T10217
Symbol
TrAtP1_012330
Name
(RefSeq) uncharacterized protein
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
tatv Trichoderma atroviride
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tatv03400
]
25779138 (TrAtP1_012330)
DNA repair and recombination proteins [BR:
tatv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
25779138 (TrAtP1_012330)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GEN1_C
XPG_I
XPG_N
DddA-like
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
25779138
NCBI-ProteinID:
XP_013945748
UniProt:
G9NN95
LinkDB
All DBs
Position
7:complement(join(1003233..1005520,1005580..1005716,1005781..1005884))
Genome browser
AA seq
842 aa
AA seq
DB search
MLTGQTKHHNHHPLSSAFDKPGEWKKVRISMGIKGIYKELGPGKRISLSKLASDSFENHN
RPFRLAIDIAIWQFQNQAARGGTNPAIRTLFYRLVRLLGTPIQPIFVFDGPNKPKFKRNR
RSGRGDGFSAAHAKRLIRLFGFIAHDAPGEAEAECAFLQKNGVVDAVLSEDVDTIMFGCT
RTMKNWSAEGKGTRPTHISMYDVDELNLASLGLDREGMVLVAIMSGGDYIPEGVPGCGPK
VACEAAKAGFGKSLCQLRASDTEGLRRWKASLIHELETNESKYFRTRHKCLTIPEDFPNM
EVLRYYTHPVVSPESMLDIIRHRLRETREIQLEGLREFARETFNWDFRVGAIKFIRVLSE
GLFVNRLHQGGVDGDSLVQKVSSQRNHFSTDGTSELRLAYIPEEIVPIDISKEVEEQIAY
ARSGLALNSDDEFAAAPGSVDAAEDGQSSGGKVFDITKPELTWVLEEVARRFAPKSVEAW
EDKKSKRKSPSKKTASGSNTKTKKADIMPHGALDSFVRVTKAVEPQEKATSSSAANTKGD
AVVNNEVCESEDSDMSLPPLPQPNRFRRPQTPPSLRQSSKQPTPNSTSPSLDGWTITSSP
DPTRRHDDAGVFEAIVISSSPAGDASPPSRFTPPSPTAATSTKRSKELPRSIRSILAAGA
TSRVTTEHSKLPASSISKTKPKTSTQAQGAAKLRQTSMDIFTQKQPQPRVDQTASSRRTE
HGPYKPTSSRESIDTATNINEIEIPSSSIPNSSPQVRFNTINEFSSPPLPASRRTRSPNP
IPIKKLIVPSASRPGFFDEVEVDADEYEETVAREAQLLKTRGVRSGVTRWSDVSFIDLTG
GT
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgggacaaacaaaacatcacaatcaccatccactgtcctcagcttttgacaag
ccgggggagtggaaaaaggttaggatatcaatggggatcaaagggatatacaaagagcta
ggccctggcaagcggatatcactgtccaagctcgcatccgatagtttcgagaatcacaac
cggccattccgcctcgccattgacatcgccatctggcagttccaaaaccaagctgcgcgt
ggcggcacgaaccccgcgattcgaaccctcttctatcgactcgtccgactcttgggaaca
cccatccagccaatcttcgtgttcgacggccccaacaaacccaaattcaaacgcaatagg
cgctcaggacgaggtgatggcttctcagcagcccatgccaagaggctcattcgacttttt
ggattcatagcgcacgatgccccaggcgaggccgaagccgaatgcgcgttcctacagaag
aatggcgtcgttgatgcggtgctcagcgaagatgtggacaccatcatgtttggatgcacg
cgaacgatgaagaattggtcggctgaaggcaagggcacacggccaacgcatatctccatg
tacgatgtcgacgaattgaacttggccagccttggcctcgatcgagagggaatggtgcta
gtggccattatgagtggcggcgactatatccctgagggagtgcctggctgtggaccgaaa
gtagcgtgcgaggctgccaaggctggctttgggaaatcattgtgtcaacttcgagcctcg
gatacagagggcctccgccggtggaaagcgtcgttgatacacgagcttgaaacaaacgaa
agcaaatactttcgaactcgccacaagtgtcttactattccagaagatttcccaaatatg
gaagtgcttcgatattatacccacccggtggtttctccagaatccatgctggacatcatc
agacacaggctgagagaaactagagagatccagttggagggcctcagggaatttgcgagg
gaaactttcaattgggattttcgagttggcgcaatcaaattcattcgcgtgctcagcgaa
ggtctatttgtgaatcgtctgcatcagggcggcgttgatggcgactctttggtccaaaaa
gtgtcgagccagcggaaccattttagtacagatggaacatctgaattacgtctggcttat
atccctgaagagattgttcccatcgacatatcgaaggaagtagaagagcaaatcgcatat
gctcggagcgggctggctctcaatagcgatgatgagtttgctgcagcgccgggcagcgtc
gacgcggccgaagatggccagagtagcggcggaaaggtgtttgatatcacaaaaccggag
cttacatgggttttggaagaggtggccaggagatttgcgccaaaatctgttgaagcctgg
gaagacaagaaatccaaacgcaaatcgccctctaaaaagacggcatcggggtcaaacacg
aagacgaagaaggcggatataatgcctcacggggcccttgacagttttgttcgcgtcacc
aaggcggtagagcctcaggagaaagctaccagcagcagtgccgccaataccaagggagat
gccgttgtaaacaacgaagtttgcgagtccgaagattcggacatgtctcttcctcctctc
cctcaaccgaaccgattccgccgaccacaaacaccgccatcgctacggcagtccagtaag
cagcccacgcccaacagcacatcccccagcctggacggttggacgataaccagctcacca
gacccaactagacgtcatgacgacgcaggagttttcgaagctatcgtcatttcgtccagc
cctgccggcgacgcatcgccaccttcacgatttacaccaccatcgccaaccgcagccacc
tcgacaaagcgcagtaaagagcttcctaggtcgatacggtcaattctggcggctggcgct
acctcgcgggtgacaactgaacacagcaaactacctgcctcttcaatatccaagacaaaa
ccaaaaacctctactcaagcccagggagcagcgaaacttcgacagacgtcaatggatata
tttacgcaaaaacagcctcaaccgagagtggatcaaactgcgtcgtctaggcgcaccgag
catggcccatataagccgacttcaagtcgagagagtatagacacagccacgaatatcaat
gaaatcgagattccatcatccagcattcccaactcatcccctcaagttcgctttaatacc
attaatgaattctcttcccctccacttccagcatcacgccgcaccaggagccctaatccc
ataccaatcaagaaactaatcgtccccagcgcttcgaggcctggcttctttgacgaagtt
gaagtagacgcggacgaatacgaggagacagtcgcgcgagaagcacaattactcaaaact
cgtggtgtaagatctggcgttacaagatggagcgatgtgtcgtttattgacttgacggga
ggaacatga
DBGET
integrated database retrieval system
