Trichoderma atroviride: 25779681
Help
Entry
25779681 CDS
T10217
Symbol
TrAtP1_008781
Name
(RefSeq) uncharacterized protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tatv Trichoderma atroviride
Pathway
tatv03420
Nucleotide excision repair
tatv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
25779681 (TrAtP1_008781)
03430 Mismatch repair
25779681 (TrAtP1_008781)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tatv03400
]
25779681 (TrAtP1_008781)
Enzymes [BR:
tatv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
25779681 (TrAtP1_008781)
DNA repair and recombination proteins [BR:
tatv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
25779681 (TrAtP1_008781)
MMR (mismatch excision repair)
Other MMR factors
25779681 (TrAtP1_008781)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
Sec3_C-term
DUF2119
PMC2NT
Motif
Other DBs
NCBI-GeneID:
25779681
NCBI-ProteinID:
XP_013942486
UniProt:
G9NXU0
LinkDB
All DBs
Position
4:4243800..4246781
Genome browser
AA seq
993 aa
AA seq
DB search
MSTASAENSILQSLNAAQRRAVTSNASTVAILAGPGSGKTHTLTSRVVWLVQQTGYQPSD
IVVATFTVKAAREMKERIGKVLGPESEKKIVLGTFHSIARRYLSAYGKHIGLDSKFGIAD
DGDSRAIIQRICKRHDFNIDPGYARSWISKKKAKGHVADPPSNKKQLENPSLNECYREYQ
EHLERSNLLDYDDLLVRCVELLRAYPACVSNIQAVLIDEYQDTNGIQYDLMKLFGQARQR
ITIVGDPDQSIYGWRSAEIRNLYRLLRDFPQTDEISLEENYRSSRSILDVSLTVIQQDKK
RYQKVLLPVHTKGTRPVLRKLKSSAAEGDWIVSEIKRAVTMFGEMLKYEDVAILLRSASL
SRHIESALGKAGLAYRMIGGHKFYERKEIKVLLDYLRVVYQPDNNDSVARIINVPRRGIG
DTTVKRLIEEAEQQKMSLWSLLRKHCQGSRKATTKILPKMEQKLNAELIRMVLNLQSHAQ
QITESSQQTLINLIEKLLSQLDFKQYLESEYPEDHEQRWQNVQEFLSLANDFVRDSANAD
EELLPEIEDVDQAKDDSTLGRFLANIALASDAQKNDEGAEKKSVITISTIHAAKGLEWPI
VFIPAVYAGSIPHSRAEDLDEERRLLYVAMTRAQVLLYLSCPLYGSQGMSGKVELSPFVS
PFESTAFAKQGASFNRPILEAAAKILKRHLPSEKAIFDKIPPMFSMEDNLFPIDPIDTRD
PEGLGDSEGYRSKGSKRQRVNNQGYGSDEEIPEERQWKKEYSTTMEQASSFTMASLPGFV
SAGTHQTVLSAAAAEEEKAAAAKKAIKMGTTRRKADQSSLLGFVTTTSSNKPATPMTGFK
GPDMSLARYQLAASRSAARLATEAKAPELPKLPAVDPSLAKHKLVSGNALNRPSVIKQEE
AEDGSSKKRYHCFSSSPPRPTDDDAKAIKEEQATPAEPAPVPDRPAASFHRTTFVSATAR
GGVRRPVGLGPPPGIDRVRRPFKPLTITRPAKQ
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacggcgtctgccgaaaactcaatcttgcagtcgctcaacgcggcccagcgccgt
gctgtcacttccaatgcatcaacagttgccatcctggcgggcccggggagtggcaagacg
catactctcacatcacgcgttgtgtggctggtgcagcaaacgggctaccagccatcagac
atcgtcgtggctacatttaccgtcaaggcagcccgtgagatgaaggagcgaatcggcaaa
gtccttggcccggagagtgagaagaaaatcgtgctcggcacttttcactctattgcccgg
cggtatctcagtgcctatggcaaacacataggccttgattccaagtttgggattgcagat
gatggcgattcgagggcaatcattcagcgcatatgtaaacgccatgacttcaacatcgac
cctggatatgcgagatcgtggatcagcaagaaaaaagccaagggccatgtggccgaccct
ccttcgaacaagaagcagcttgagaatccgtccttgaatgaatgctacagggaataccag
gagcacttggaacgatcaaatttactagactatgacgacctattggtgcgctgcgtggag
ttgttgagagcgtatccagcttgtgtctcaaacattcaagcggttctcattgacgaatat
caagacacaaacggtattcagtacgatttgatgaaattatttggccaggctcgtcaacgc
ataacgattgtcggtgatcctgaccagagcatttatggctggcgatcagctgaaatccga
aacctgtaccgactgctacgggactttccccaaacagatgagatttcgctggaagaaaat
taccggtcatctcggtcaattctcgacgtatctttaaccgttattcagcaagataagaag
cggtaccaaaaagtgcttcttccggttcatacaaaaggcacaaggccagttctacgaaag
ttaaagagctctgctgcagaaggtgactggattgtctccgagattaaacgagctgtcaca
atgtttggggagatgctcaagtatgaagacgtagccattctgctacgatctgcatccctt
tcaaggcatatcgaatcagcgttgggcaaggcggggctggcctatcggatgattggcggt
cacaagttttacgaacgaaaggagatcaaagttctgctagattatctgcgtgtcgtatat
cagccggataacaatgactccgttgcacgaatcatcaacgtcccccgtcgcggaattgga
gacacgacagtcaagcgtctcatagaagaggccgagcagcaaaaaatgagcctgtggtcg
ctgttgagaaagcactgtcaaggcagccgcaaagcaacgacaaaaatattacccaagatg
gagcagaaactaaatgccgaactaataagaatggtattaaatcttcaaagccacgctcag
caaatcaccgagagtagccagcaaacgttgattaatcttattgagaagctgctatcgcag
ctcgatttcaagcaatacctagagtccgagtatccagaagatcacgagcagaggtggcaa
aacgttcaagagttcctcagcttggctaacgactttgtgcgggactcggcaaacgcagat
gaggagctgttgccagagattgaggatgttgatcaggccaaagacgacagcaccttgggc
cgattcttggcaaacatagcgctggcatccgacgctcagaaaaatgatgaaggggcggag
aagaaatcagtgattactatatcaaccattcatgctgccaagggactcgagtggcccata
gtgtttataccagccgtctatgccggctcaattcctcactccagagcagaggatttggat
gaggaaagacgactgctttacgtagcaatgaccagagcgcaggtgctgctctatctcagc
tgtcctttgtacggatctcagggcatgagtggcaaggttgagctatcgccgtttgtttcg
ccttttgagtcgacggcttttgctaagcaaggggcatcgtttaacagaccaatcctagaa
gcagccgcaaaaatcctcaagagacatctccccagtgagaaggcaatatttgacaagatt
ccgcccatgttctctatggaggataatctgttcccaatagatcccatcgacacaagagac
ccagaaggactcggtgactcagaaggttatcgctccaagggatccaaacggcagcgtgta
aacaaccaaggttatggtagcgacgaagagattcccgaagaacggcagtggaagaaggaa
tacagtacgactatggaacaagcgtctagctttactatggcctctttgcccggctttgta
tcggctggaacgcatcaaaccgtcctctctgcggccgctgctgaagaagaaaaggcagca
gcagccaaaaaggccataaagatgggcaccacccgacgaaaagcagatcagtcaagcttg
ctcgggttcgtaacaacaacttcttcaaacaagccagcgactccaatgactgggtttaaa
ggccccgatatgtccctggctcggtaccagcttgcggcatcccgctctgcagcccggcta
gctaccgaggcgaaggcccccgagctgccaaagcttcccgccgtcgatccatcattggca
aaacacaaactcgtgagcggcaatgctctgaatcggcccagcgtaataaagcaagaagaa
gctgaagacggcagttccaagaagcgctaccactgcttctctagctccccgccaaggcca
actgacgacgacgccaaggcaattaaagaagagcaggctactcctgcagaacctgctcct
gtaccggaccgtcctgccgccagcttccacaggacgacttttgtttcggccacggcgaga
ggcggcgtaagacgtccagtaggcttgggccctccgccggggattgatagggttcgcagg
ccgtttaagccattgacgataacgcgcccagcgaagcaatga
DBGET
integrated database retrieval system
