Trichoderma atroviride: 25780171
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Entry
25780171 CDS
T10217
Symbol
TrAtP1_005443
Name
(RefSeq) uncharacterized protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tatv Trichoderma atroviride
Pathway
tatv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
25780171 (TrAtP1_005443)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tatv03041
]
25780171 (TrAtP1_005443)
03009 Ribosome biogenesis [BR:
tatv03009
]
25780171 (TrAtP1_005443)
Enzymes [BR:
tatv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
25780171 (TrAtP1_005443)
Spliceosome [BR:
tatv03041
]
Complex A
U1 snRNP components
U1 related factors
25780171 (TrAtP1_005443)
Complex B
25780171 (TrAtP1_005443)
Ribosome biogenesis [BR:
tatv03009
]
Eukaryotic type
Pre-60S particles
Helicases
25780171 (TrAtP1_005443)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Rod_N
Helicase_C_2
Utp25_C
Glyoxalase_3
P-loop_SecA
FtsK_SpoIIIE
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
25780171
NCBI-ProteinID:
XP_013944793
UniProt:
G9NRF7
LinkDB
All DBs
Position
3:join(658557..658699,658885..659021,659117..660085,660160..660267,660785..660913,660976..661139)
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AA seq
549 aa
AA seq
DB search
MSGYGGGRSNGGGYGGGGGGGGYGRDRGDRGDRGGDRNGHGGGGYGGGRGGFGNGHGGGF
GGGGYGGGGGGGYGGGGGDRMGHLGAGLQRQEWDLSTLPKFEKDFYKEAPEVAARDAAEV
EAFRRKHQMTIAGSDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRD
VVGIAETGSGKTLTYCLPAIVHINAQPLLSPGDGPIVLILAPTRELAVQIQQEISKFGRS
SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRM
LDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAANHRI
TQIVEVVTEMEKRDRMIKHLEKVMENKENKILIFVGTKRIADEITRFLRQDGWPALSIHG
DKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTG
RAGQNGTAITLFTTDNQKQARDLVNVLQEAKQQIDPRLAEMTRYGGGGGGRGYGGYRGRG
GGRGGYRRW
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctacggcggcggtcgatccaacggcggcggttacggaggcggcggcggcggt
ggtggttacggtcgtgatcgcggtgatcgcggcgatcgcggcggcgaccgcaacggccac
ggaggcggtggatatggcggaggccgtggcggattcggcaatggacacggcggcggattc
ggaggcggtggctatggtggaggtggtggtggtggttacggaggcggcggtggtgaccga
atgggccacctcggcgctggtctgcaaagacaagaatgggatctatccactcttcccaag
ttcgaaaaggacttctacaaggaggctcctgaagtcgccgctcgcgacgctgccgaagtc
gaagcgttccgtcgcaaacatcagatgaccattgccggctcagatgttcccaagcccgtc
gagacctttgacgaggctggattccctcgctacgtcatggatgaggtcaaggctcagggc
ttccctgctcctaccgccattcagtctcaaggatggcccatggctctttctggacgtgat
gttgtcggtattgccgagaccggttccggaaagactctcacatactgtcttcccgccatt
gttcacatcaacgctcagcccctcctgtcccctggtgacggccccatcgtcctgatcctc
gcccccactcgtgagcttgctgtccagattcagcaagaaatctcaaagtttggtcgctca
tcacgcatccgcaacacctgtgtctacggcggtgtccccaagggtccccagattcgtgac
ctctcccgcggtgtcgaggtctgcattgccactcctggccgtctcatcgacatgctcgag
gctggcaagaccaaccttcgtcgtgtaacttacttggtcctcgacgaggctgatcgcatg
ctggacatgggtttcgagccccagattcgcaagattatcgagcagattcgacctgaccga
cagactctcatgtggtccgctacatggcccaaggaagtccgtgctctcgcctccgacttc
ttacaggactttatccaggtcaacattggttccatggaactggctgccaaccacagaatt
acccagattgtggaggttgtcaccgaaatggagaagagagaccgcatgattaagcatctg
gaaaaggtcatggagaacaaggagaacaagatcctcatctttgttggcaccaagcgtatc
gccgacgagattacccgattccttcgccaggacggctggcccgctctctcaattcacgga
gacaagcagcaaaacgagcgagactgggtcctcgaccagttcaagaccggaaagagccct
atcatggttgctaccgacgtggcatcccgtggtatcgatgttcgcaacatcacccatgtg
ttgaactacgactaccctaacaactcggaggattacatccatcgtattggccgtaccggt
cgtgctggccagaacggaactgccattacgctcttcaccactgacaaccagaagcaggct
cgtgatctcgtcaatgtgctccaggaagccaagcaacagatcgatcctcgtctggctgag
atgacccgctacggtggtggtggtggcggccgcggctacggcggttaccgtggccgtgga
ggcggtcgcggtggatatcgtcgatggtaa
DBGET
integrated database retrieval system
