Trichoderma atroviride: 25780209
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Entry
25780209 CDS
T10217
Symbol
TrAtP1_013096
Name
(RefSeq) uncharacterized protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
tatv Trichoderma atroviride
Pathway
tatv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
25780209 (TrAtP1_013096)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tatv03019
]
25780209 (TrAtP1_013096)
Enzymes [BR:
tatv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
25780209 (TrAtP1_013096)
Messenger RNA biogenesis [BR:
tatv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
25780209 (TrAtP1_013096)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
nSTAND3
KTI12
AAA
AAA_16
ATP_bind_1
IstB_IS21
SRPRB
AAA_22
RuvB_N
AAA_30
MobB
MMR_HSR1
AAA_18
nSTAND_NTPase5
FeoB_N
TniB
AAA_24
AAA_28
ABC_tran
AAA_33
AAA_35
AAA_7
ATPase_2
Mg_chelatase
DAP3
CbiA
ATPase
NTPase_1
KOW7_SPT5
Zeta_toxin
Sigma54_activat
NPHP3_N
AAA_5
Motif
Other DBs
NCBI-GeneID:
25780209
NCBI-ProteinID:
XP_013944210
UniProt:
G9NTG7
LinkDB
All DBs
Position
7:join(3326734..3326769,3326835..3327624,3327686..3327952,3328023..3328285)
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AA seq
451 aa
AA seq
DB search
MSIPGLGQIPVQAAVSSTRTISLRPAWEWRFQVSPGSSVVLKVLAGTAEKDGVELALRNA
YTFSGVRSKILTWHGCELEIEGRCDSDSVAEYLNPIVNPATSHINLHARLSDLRVDATRQ
RREGPRVLVVGPPNSGKTTLAKTLTSYATRQGYQVITVNANPRDGMLSLPGTLSASVFAT
VMDPEAVDGWGSTPTSGPSTVPVKLPMVFHYGWESAEEDEDLYRELIGRLAGAVSGRLSE
DEEVRGSGVIVDGIGVSGDGQIGMELTAHVMDEFSINIVVVIGPASLHKDFSNRFANERT
SLGEPIQVVSIDESDGVVKRDEAFSQHSREAVIKEYFFGDAKRTLSPQIQQVDFDSLVIY
KLADYSPDEKQSLVLEEPSSLMQHWTFAVMNASVRDSPDVIRAANVMGFVYVADVDEDRR
KIKMLAPVSGRLGDKPLVWGKWPEPYINLLG
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtccatccccggccttgggcaaatcccggtacaagccgccgtttcctccacacgaacc
atctccctgcgtcccgcctgggaatggcgattccaagtatctccgggctcctccgtcgtg
ctcaaggtcctcgccggcacagctgaaaaggacggcgtcgagctcgcgctgcgcaatgcc
tacacgttttccggcgtccggtccaagatcctgacctggcacggctgcgagctggagatt
gaggggcggtgcgacagcgactccgtggccgagtacctgaaccccatagtcaatcccgcg
acttcacacatcaatctgcatgcgcggctgagcgacctgcgtgtggacgccacgcggcag
cggcgcgaggggccgagggtcctggtggttggcccgccgaactcgggcaagacgacgctg
gccaagacgctgacgagctacgctacgaggcaagggtaccaagtcatcacggtgaatgcg
aacccgagagatgggatgctgagcttgccgggcacgctgagcgcgagcgtgtttgcgacg
gtcatggatcccgaggcggtggacggctgggggtcgacgccgacgagcgggccgagcacg
gtgcctgtcaagctgcccatggtgttccactacggctgggagagcgcggaagaagacgag
gatctgtatcgcgagcttataggcaggctggcgggtgctgtcagtggccggctgagcgag
gacgaggaggttcgcggatcgggcgtcattgtggatggcataggggtcagcggggacggc
cagattgggatggagctgactgcgcatgtcatggatgagttttccatcaacatcgtggtg
gtgattgggcccgcgtcactgcacaaggatttttcaaatcgattcgccaacgaaaggacg
agtcttggcgagcccatacaagtggtttccattgacgagtcggacggcgtggtcaagagg
gacgaggcgttttcgcagcactcgcgcgaggcggtcatcaaggagtacttttttggagac
gcaaagaggacgctgagtccgcagattcagcaggtggactttgacagcctggtgatttac
aagcttgcagactattctcctgatgaaaagcagagcttggttttagaagagccctcgtct
cttatgcagcactggacatttgcagtcatgaacgcctctgtgcgggacagcccggatgtg
atccgcgcggccaatgtcatgggctttgtgtatgtggcggatgtggatgaggacaggcgc
aagattaagatgctggcgccggtgagtgggaggctgggagacaagccgctggtatggggc
aagtggccggagccgtacattaatctgctgggatag
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