Trichoderma atroviride: 25780383
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Entry
25780383 CDS
T10217
Symbol
TrAtP1_001542
Name
(RefSeq) uncharacterized protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
tatv Trichoderma atroviride
Pathway
tatv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
25780383 (TrAtP1_001542)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tatv03009
]
25780383 (TrAtP1_001542)
Ribosome biogenesis [BR:
tatv03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
25780383 (TrAtP1_001542)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Cytochrom_D1
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_DCAF4
DUF7165
NBCH_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
25780383
NCBI-ProteinID:
XP_013941461
UniProt:
G9P101
LinkDB
All DBs
Position
1:complement(join(4301184..4301521,4301595..4304271,4304342..4304452))
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AA seq
1041 aa
AA seq
DB search
MPHSDPDGPLAKRQKVSTLANASETPSNSSRIFAPFRTVGLISPSNIPFTSVPLGKTTFQ
ITTSVGRSLQTYDLLRGLNLVFVTRPQTLADITATLAWGKKVFAAWGGSQDGEPQGLWVF
QRGRKIAEVALPSDLAEPIQQITIFGTWFIACAKTRIEVFKTATLEHYTTIHTMAASKGG
HEITGGVVTMPTYLNKIFVGRKDGWVEIWNISTGKLIYTLLPPSPDSGAVTCLEPTPALS
MLAIAYSNGSLVITNVLTDKRVLQVEAGHADAPVTSISFRTDGLGAGHDGRKDGVMATAT
PASGDITFWDLNRGGRVMGVLRSAHNPPSGEGGAVLGGISKVEFLSGQAVIVSSGRDNSL
KTWIFDETPFSPIPRILHSRSGHSGPVNCLQFLPSDFDGAEAGNKWIISGGKDRSLWGWS
MRRDGQSTELSQGNIRKKAKKIGILATSALSHGPTTTLEDLKAPEITCIATSLNRDGGIG
ALPGKQEIWQKGRDLSKKMDAELSGMTGWESVVTAHKGDPCARTWFWGRKRAGRWALPTG
DGTDVTTVAISPCGTFALVGSGAGGIDMYNLQSGVHRQRFPSKLTPAQARQLKMQQLRQA
DDVVQLQSEGNRKYPAGVGKHTKAITGLVVDSMNKTVVSCGLDGKIKFWDFLTGTLLEQL
DWAPMTFPTGCRYHPANNLLAFSCDDLSIRVVDLETKKTIREFWGPKDVINDFCFSNDGR
WIIAASRDSVIRIWDLPTSHLIDAIRLEKPCKAVAMSFTGEYLAAALEDSPGVTIWTNKA
LYKHVPTRQISEAEIGLVAAPTTAGEGNQGLLEAAFEDDQEEEDSGVVAPSIDQISSDLM
TLSLVPKSRWQTLLHLDLIKERNKPTEAPKLPEKAPFFLPSTSGAQAPGLKDDAEQAEMD
SKSRISRYDQDRFEEAFTSKLRAGAENNNYDDFIEHLKSLSPSSADLELRSLSLGDDDES
NELLLFIRALTTRLQARKDYELTQAWMTVFLRLHFDLVMENKALLKALEEWKEQQEKECN
RLDDLVGYCSGVVTFLRSPRT
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgccgcattccgatcccgatggcccgctggcaaagcgccagaaagtctcgaccttggcc
aatgcgtccgaaactccaagcaattcctcgcgaatctttgcgcctttcagaactgttgga
ttaatctccccatccaatatcccattcacttcggttccgttaggtaaaacaacttttcaa
atcacaacatcggttggtcgatctctgcagacgtacgacttgctccgcggtctcaatctc
gtgttcgttactcgaccacaaacgctcgccgacattactgctacgttagcctggggaaag
aaggtctttgcggcatggggtggatcgcaagatggcgagcctcaaggcttatgggtcttt
caaagaggtagaaagattgctgaggtagccctcccaagcgacttggcggagccaattcaa
caaatcacaatctttggaacctggttcattgcttgcgccaagacgaggattgaggtattc
aaaacggcgacgcttgagcattacaccaccatccacaccatggctgcttccaagggtggc
catgagatcacgggtggcgttgtcactatgccaacctatctgaacaagatctttgttggt
cgcaaagacggctgggttgaaatctggaatattagcaccggaaagctgatatataccctt
ttgccgccttcgccggattctggagctgtcacttgtctcgagccaaccccagcgctctct
atgctggcgatcgcatactcgaacggttccctggtcatcaccaatgttctgactgataag
cgcgttcttcaagtcgaagccgggcatgcagacgcccccgttacctcaatatccttccgg
accgatggcttgggagctggacacgacggtagaaaggatggcgtcatggccactgctacc
ccggcttctggcgacatcaccttctgggatctaaaccgtggaggtcgtgtgatgggagtc
ctacgcagcgctcacaacccaccatcaggcgagggtggtgctgttcttggcggtatcagc
aaagtcgaattcctgtctggacaggcagtcatcgtttctagcggccgggataactcgctg
aagacgtggatcttcgacgaaacacccttttcccctatcccgagaatcttacattcacgt
agcggacattctggaccggttaattgcctacagttcttaccttccgattttgacggcgcc
gaagccggaaacaaatggatcatcagcggtggcaaagataggagtctttggggatggagt
atgcgccgcgatggccagagtacggagctcagccaaggcaatattcgcaagaaggcaaag
aagattggtatactggctaccagcgcactttcacatggtccaacaacgactttggaagac
ctcaaagcccccgaaatcacctgtattgccacttcgctcaatcgcgatggcggcattggc
gcattgccggggaaacaggagatttggcaaaagggacgagacctcagcaagaagatggac
gctgagcttagtggcatgacgggctgggaaagtgttgtcacagctcacaagggcgaccct
tgcgcccgtacctggttctggggccgaaagagagctggtcgttgggcactcccgacagga
gacggcaccgacgttaccactgttgccatcagcccttgcggaactttcgcactggtcggc
tccggagctggtggcattgacatgtacaatcttcaatctggtgtccaccgccagcgcttc
ccgtccaagttgacgccagcgcaggctcgccagctgaagatgcagcaacttcgacaagca
gatgatgttgtccagctacagagcgaaggcaaccgaaaataccccgccggcgtcggtaaa
cataccaaggccattactggtttagttgtcgattctatgaacaagactgtggtatcttgt
gggttggatggtaagatcaagttttgggactttttgacaggaacccttcttgaacagctg
gactgggcacccatgacattcccaactggatgccgataccatccagccaacaaccttttg
gcattttcttgcgatgatttgtctatccgagttgtggacctggagacgaaaaagacgatt
cgtgaattctggggtcccaaggatgtcatcaacgacttttgcttttccaacgatggccgg
tggattatcgctgcctcgcgcgattccgtgataaggatatgggatctgcccaccagccac
cttatcgatgctattcggttggagaagccttgtaaagctgttgccatgtcattcaccggc
gaatatctcgctgcagctctcgaggatagccctggcgttacgatatggacgaacaaggcc
ctgtacaagcacgtcccaactcgccagatatccgaagcggaaattggtctggtggctgca
cctacgacggctggagaaggaaaccaaggcttgctggaagctgcctttgaagacgaccag
gaggaggaagacagtggcgttgttgcgccttcaattgatcagatcagctcagacctgatg
acgttgagtttggttcccaagagcagatggcagacgctgctccatctggatttgatcaag
gagcgaaacaagccgaccgaggcgccaaagctccccgaaaaggctccctttttcttgcca
tccacttctggtgcgcaagcgcctgggctcaaggacgatgctgagcaagcagagatggat
agcaagtctcgtatctcgagatatgaccaggaccgctttgaagaggcatttacgtcgaag
ctgcgtgctggtgctgaaaacaacaattacgacgatttcatcgagcacctcaagtctctc
tctccttcaagcgcggatctggagcttcgatcactttccctgggcgatgacgacgagtca
aacgagctgctgctattcatccgagcgcttacgactagactgcaagcacgaaaagattac
gagttgacgcaggcgtggatgacagtgttcctccgactacactttgacttggtgatggag
aataaggctttgctgaaggctcttgaggagtggaaggagcagcaggagaaggaatgcaac
aggctggatgatttggttggatactgcagcggcgtggtcacgtttttgagaagcccgcgg
acatga
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