Trichoderma atroviride: 25780447
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Entry
25780447 CDS
T10217
Symbol
TrAtP1_004750
Name
(RefSeq) uncharacterized protein
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
tatv Trichoderma atroviride
Pathway
tatv03030
DNA replication
tatv03410
Base excision repair
tatv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tatv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
25780447 (TrAtP1_004750)
03410 Base excision repair
25780447 (TrAtP1_004750)
03420 Nucleotide excision repair
25780447 (TrAtP1_004750)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tatv03032
]
25780447 (TrAtP1_004750)
03400 DNA repair and recombination proteins [BR:
tatv03400
]
25780447 (TrAtP1_004750)
Enzymes [BR:
tatv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
25780447 (TrAtP1_004750)
DNA replication proteins [BR:
tatv03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
25780447 (TrAtP1_004750)
DNA repair and recombination proteins [BR:
tatv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
25780447 (TrAtP1_004750)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DUF4606
Motif
Other DBs
NCBI-GeneID:
25780447
NCBI-ProteinID:
XP_013939658
UniProt:
G9P5B6
LinkDB
All DBs
Position
2:complement(join(5786846..5788478,5788536..5789227))
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AA seq
774 aa
AA seq
DB search
MDKTPAPIFRKQRPLIPSSSVAPSSSPAFGTPVYPPKPFNINAPKAAILPIILPPATLRP
LAFRTFTKKHSLTLTSSALQELASFIGRHCGSGWREEGLAERVLEEVARSWKNRNGGVMV
EGSSKELQEILKTLEGNMSGGKIMGPGRELPRGDSMLDITDNDTLNTRLGIRPTSLPRQD
SNASFGMSGLGMQEEAGDDEETNDARAWLKVIDAYEQPRLLYNVDKKHFERDTAKPSLLP
PASHKTTVFRNRYHVIHQRLLRNESFQVSAVTSSRRHTLQRSLSNQQSLKITPIANLLGR
HGSNHMLLGQLNILPTGDLAVSDLTGTIALDLTQAVAIPEDSAWFCPGMMVLVDGVYEEE
EESVGKGLSGSSGVGGTLGGRFQGFFIGQPPCEKRKSTLGISGPDGNDHDQTIGGGFGWI
DFLGIGSERAIGSKMRRLERRLLPSSLDQDMPSRNRLVIIGEINLDQPRALQALRKILSL
YAAEPEGTSPLTFVLAGNFTQHAVMARGGSGGSIEYKEYFDALASTFSDFPTLLESSTFV
FVPGDNDGWVSSFTGGASVPLPRKPVPDMFTSRIRRAFAAANAEAGNTGVQGSAVWTSNP
SRMSLFGTNHELVLFRDDISARLRRTSVTLKRTAAAESHGVQENASPEIQQDDSTTAAAE
DAMEVDSAEKPPSSLPLDIKTAQKLVKTILDQGYLSPFRQSTRPVHWDYASALHLYPLPT
AMALIDTTAPPFCITYEGCHVMNPGSILVSGRKGVGRWVEYEIGRQGRVRECTL
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaacaccagcgcccatcttccgcaagcagcgacctctaatcccatcttcgtcc
gttgcgccatcgtcatctccggcattcggaacgccagtctaccctccaaagccattcaac
atcaatgctcccaaagccgccatcctccccattatcctgccgccggcgactctccgaccg
ctcgcattccgcacatttacaaagaagcactcgctcacgctcacatcgtctgcattgcaa
gagcttgcctcgttcatcgggcggcattgcggctcaggatggcgcgaggaaggcctagca
gagagggtgctggaagaggtggcccggagttggaagaatcgcaatggcggtgtcatggta
gaagggtctagcaaagagctacaggagatcctcaagaccctggagggcaatatgagcggc
ggcaagatcatgggtcctggcagagagcttcccagaggagacagcatgctggatatcacc
gataacgataccctaaacaccagacttggcataaggccgacctcactcccacgacaagat
agtaatgctagctttggtatgtcgggattgggtatgcaggaggaggcaggcgacgacgag
gaaaccaacgatgcccgagcatggctgaaagtcatcgatgcgtatgaacagccacgactc
ctttacaacgttgataagaaacactttgaaagagatacggccaagccctcattattaccc
cccgcctctcacaaaaccaccgtcttccgaaaccgctaccacgtcatccaccaacgcctc
ctccgaaacgaatcattccaagtctccgctgtcacttcgtcccgtagacatacacttcag
cgctcactttccaatcaacagtccctcaaaatcacgccaatcgccaatttgcttggtcga
cacgggagcaatcacatgctcctcggtcagctaaatatcctacccacaggagacctggct
gtaagtgatttgacgggcaccattgctctcgaccttacacaagctgttgccattcctgag
gattcggcatggttttgccctgggatgatggttcttgtggatggtgtgtatgaggaagaa
gaggagtctgttggcaaaggattgagcggcagcagcggtgttggaggtacccttggcggc
cgctttcagggtttctttatcgggcaacctccatgcgagaagcgtaagtcgactctcggc
atcagcggccctgatggcaacgaccatgatcaaacaattggagggggcttcggctggatc
gatttccttggcattggcagcgaacgagctatcggttccaaaatgcggaggctagagaga
aggctgctcccatcctccttggaccaggatatgccctcccgaaatcgactagtcatcatt
ggtgaaatcaatctcgatcagcctcgggctcttcaggccctccgcaaaattctctcctta
tacgctgctgaaccggaaggcacctcccctctcacatttgtcctagccggcaacttcaca
caacacgccgtcatggccaggggcggcagcggtggcagcattgaatacaaagaatacttt
gacgccctggcctctaccttctccgatttccctaccctcctcgagtcatccacctttgtc
ttcgtcccaggcgacaatgatggctgggtctcctctttcacaggtggtgcctccgtacca
ctgccccggaaacctgttcctgacatgttcacctcacgcatccgccgtgcttttgctgca
gcaaacgcagaagctggcaacacaggcgttcaaggatctgcagtgtggacgagcaaccca
agccgaatgtcccttttcggaacgaaccatgaactagtattattcagagacgacatctct
gccagattaaggcgcacttcagtcaccctcaagcgcacggccgccgccgaatcgcacggg
gtccaagaaaacgcctcacccgaaatccaacaggatgattcaaccaccgctgcggcagaa
gacgccatggaagtcgattccgcagaaaagcccccatcttctcttccactcgacatcaag
acagcccagaagctcgtcaagacaatcctcgaccaaggctatctgtctcccttccgccaa
tcaacgcgccccgtacactgggactacgcatccgcgctgcacttgtaccctctcccaact
gcaatggcactcatcgatacgacagctccgcccttttgcatcacatatgaaggctgccat
gtcatgaatccgggaagcatcctcgtatctgggcgaaagggcgtaggaagatgggtggaa
tatgagattgggcggcaagggagagtaagggagtgtactctatag
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